Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.2949.1	Xcc-8004.2950.1	Xcc-8004.2951.1	Xcc-8004.2952.1	Xcc-8004.2953.1
carbon source	Citric Acid 16.67 mM (C)	-3.7	-3.0	N.D.	-0.7	-0.3
carbon source	Citric Acid 10mM (C)	-4.0	-0.9	N.D.	-1.6	-0.1
carbon source	D-Fructose 16.67 mM (C)	-4.0	-1.9	N.D.	-0.1	+0.0
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-4.7	-0.7	N.D.	+0.1	-0.4
carbon source	D-Glucose 16.67 mM (C)	-3.3	-2.1	N.D.	+0.3	-0.1
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	-3.7	-0.5	N.D.	+0.1	-0.2
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	-2.9	-1.4	N.D.	+0.1	-0.0
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-2.9	-1.9	N.D.	+1.0	-0.1
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-2.2	-1.4	N.D.	+0.0	+0.0
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-1.0	-2.4	N.D.	+0.0	+0.0
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	-2.3	-0.6	N.D.	+0.0	-0.1
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-2.1	-0.8	N.D.	+0.2	-0.1
carbon source	Pectin from apple 2 g/L (C)	-1.5	-1.0	N.D.	-0.0	-0.1
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-1.3	-0.6	N.D.	-0.6	+0.3
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	-1.2	-0.9	N.D.	-0.3	+0.0
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-1.3	-1.1	N.D.	+0.4	-0.2
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	-1.8	-0.2	N.D.	+0.1	-0.0
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.9	-1.0	N.D.	-0.2	+0.3
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.6	-0.9	N.D.	+0.2	-0.3
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-0.9	-0.8	N.D.	+0.1	+0.1
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-1.0	-0.5	N.D.	+0.2	-0.0
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-1.3	-0.1	N.D.	+0.2	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.0	-0.6	N.D.	+0.5	-0.1
in planta xylem	Xylemvessel barcodes T1L3P4	-0.8	+0.5	N.D.	-0.4	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.8	+0.5	N.D.	+0.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6	+0.2	N.D.	+0.7	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.9	-0.3	N.D.	+0.8	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.6	+0.6	N.D.	+0.5	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.5	+0.3	N.D.	+0.1	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5	+0.4	N.D.	+0.9	+0.1