Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

Group	Condition	Xcc-8004.2825.1	Xcc-8004.2826.1	Xcc-8004.2827.1	Xcc-8004.2828.1	Xcc-8004.2829.1
in planta xylem	Xylemvessel barcodes T0L1P4	-0.2	-0.1	-0.2	-0.1	-0.3
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	-0.1	-0.2	-0.1	-0.2	-0.3
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-0.2	+0.0	-0.1	-0.4	-0.1
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+0.0	+0.1	-0.3	-0.5	-0.1
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-0.0	+0.1	-0.5	-0.4	+0.1
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	+0.1	+0.0	-0.1	-0.5	-0.2
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+0.1	+0.1	-0.2	-0.1	-0.3
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	+0.0	+0.1	-0.2	-0.1	-0.2
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	-0.1	-0.0	+0.0	+0.2	-0.3
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	+0.1	-0.2	-0.2	+0.1	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.0	-0.1	-0.1	+0.1	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.0	-0.1	-0.2	+0.1	+0.4
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	+0.2	-0.0	+0.1	+0.2	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	+0.1	-0.1	-0.0	+0.4
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+0.2	+0.5	+0.1	-0.5	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	-0.0	-0.1	+0.0	+0.4
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	+0.1	-0.1	+0.0	+0.3	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	-0.0	-0.0	+0.2	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.2	-0.0	-0.1	+0.0	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	+0.1	-0.1	+0.0	+0.3
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	+0.1	-0.0	+0.3	+0.2	-0.0
in planta xylem	Xylemvessel barcodes T0L2P4	+0.1	-0.1	+0.1	+0.1	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.1	+0.0	+0.0	+0.1	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.0	-0.1	-0.1	+0.1	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	+0.2	-0.1	+0.3	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.0	+0.0	-0.1	+0.2	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.0	+0.1	+0.0	+0.1	+0.4
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	+0.1	-0.0	+0.3	+0.2	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.1	+0.1	+0.2	+0.0	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	+0.0	+0.0	+0.1	+0.5