Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.2403.1	Xcc-8004.2404.1	Xcc-8004.2405.1	Xcc-8004.2406.1	Xcc-8004.2408.1
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.3	+0.1	+0.1	-4.0	+0.2
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	-0.5	+0.1	-0.1	-3.9	+0.5
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.0	+0.3	+0.3	-3.2	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.2	-0.4	-0.0	-2.4	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.4	-0.0	-0.1	-2.7	+0.1
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	-0.0	+0.0	-0.3	-3.8	+1.1
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	-0.3	-0.3	+0.3	-2.4	-0.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.2	+0.0	+0.1	-2.5	-0.3
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	-0.2	+0.3	-0.1	-2.6	+0.1
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-0.1	-0.3	+0.1	-2.3	+0.1
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	-0.1	-0.2	+0.2	-2.4	+0.1
r2a control	R2A control	-0.1	-0.4	-0.2	-1.6	-0.0
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.0	+0.2	+0.0	-2.6	+0.2
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.2	-0.1	+0.0	-2.2	+0.4
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	-0.2	-0.2	-0.2	-2.3	+0.9
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+0.2	-0.1	+0.0	-2.2	+0.0
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.0	-0.1	-0.0	-2.0	+0.2
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	+0.2	-0.0	-0.4	-3.0	+1.4
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	+0.0	-0.0	+0.2	-2.2	+0.3
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-0.0	+0.3	-0.0	-2.0	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	-0.6	+0.4	+0.1	-1.6
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	+0.1	+0.1	-0.2	-2.9	+1.5
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	+0.3	+0.5	-0.2	-2.7	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6	-0.3	+0.3	+0.1	-0.7
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-1.1	+0.9	+0.2	-0.2	-0.9
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-0.9	+0.8	+0.2	-0.1	-1.0
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	-0.3	-0.4	+0.3	-0.7	+0.4
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	+0.1	-0.7	-0.0	-1.0	+0.8
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	+0.0	+0.5	-0.2	-1.7	+1.2
carbon source	Citric Acid 16.67 mM (C)	+0.6	+0.3	-0.3	-2.2	+2.0