Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

500 ntXcc-8004.2339.1 and Xcc-8004.2340.1 overlap by 1 nucleotidesXcc-8004.2340.1 and Xcc-8004.2341.1 overlap by 4 nucleotidesXcc-8004.2341.1 and Xcc-8004.2342.1 overlap by 8 nucleotidesXcc-8004.2342.1 and Xcc-8004.2343.1 are separated by 123 nucleotides Xcc-8004.2339.1: Xcc-8004.2339.1 - Cytochrome c heme lyase subunit CcmH, at 2,287,228 to 2,288,241 Xcc-8004.2339.1 Xcc-8004.2340.1: Xcc-8004.2340.1 - Cytochrome c heme lyase subunit CcmL, at 2,288,241 to 2,288,675 Xcc-8004.2340.1 Xcc-8004.2341.1: Xcc-8004.2341.1 - Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase, at 2,288,672 to 2,289,274 Xcc-8004.2341.1 Xcc-8004.2342.1: Xcc-8004.2342.1 - Cytochrome c heme lyase subunit CcmF, at 2,289,267 to 2,291,204 Xcc-8004.2342.1 Xcc-8004.2343.1: Xcc-8004.2343.1 - Cytochrome c-type biogenesis protein CcmE, heme chaperone, at 2,291,328 to 2,291,786 Xcc-8004.2343.1
Group Condition Xcc-8004.2339.1 Xcc-8004.2340.1 Xcc-8004.2341.1 Xcc-8004.2342.1 Xcc-8004.2343.1
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -6.0 N.D. N.D. N.D. -0.4
in planta xylem Xylemvessel barcodes T0L1P3 -1.7 N.D. N.D. N.D. -2.4
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -1.1 N.D. N.D. N.D. -2.7
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -1.9 N.D. N.D. N.D. -1.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.4 N.D. N.D. N.D. -1.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.5 N.D. N.D. N.D. -0.5
in planta xylem Xylemvessel barcodes T0L1P4 -0.2 N.D. N.D. N.D. -2.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 N.D. N.D. N.D. -3.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 N.D. N.D. N.D. -2.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.2 N.D. N.D. N.D. -0.4
in planta xylem Xylemvessel barcodes T0L2P4 -0.9 N.D. N.D. N.D. -1.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 N.D. N.D. N.D. -2.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 N.D. N.D. N.D. -1.5
carbon source Citric Acid 16.67 mM (C) -0.5 N.D. N.D. N.D. -1.8
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 N.D. N.D. N.D. -1.8
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -1.8 N.D. N.D. N.D. -0.4
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.9 N.D. N.D. N.D. -1.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 N.D. N.D. N.D. -1.9
clovis xylem sap Clovis xylem sap -1.2 N.D. N.D. N.D. -0.9
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.7 N.D. N.D. N.D. -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.2 N.D. N.D. N.D. -1.7
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) -0.5 N.D. N.D. N.D. -1.3
moka MOKA -0.4 N.D. N.D. N.D. -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.6 N.D. N.D. N.D. +1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 N.D. N.D. N.D. -1.4
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days +1.2 N.D. N.D. N.D. -1.7
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +1.8 N.D. N.D. N.D. -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 N.D. N.D. N.D. +1.2
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +1.8 N.D. N.D. N.D. +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 N.D. N.D. N.D. +0.7
remove
Xcc-8004.2339.1
plot		 remove
Xcc-8004.2340.1
plot		 remove
Xcc-8004.2341.1		 remove
Xcc-8004.2342.1
plot		 remove
Xcc-8004.2343.1
plot