Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

Group	Condition	Xcc-8004.2201.1	Xcc-8004.2202.1	Xcc-8004.2203.1	Xcc-8004.2204.1	Xcc-8004.2205.1
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-0.1	+0.1	-0.4	-0.7	-0.1
carbon source	Citric Acid 16.67 mM (C)	-0.7	-0.8	+0.1	+0.4	+0.1
r2a control	R2A control	+0.1	-0.5	-0.3	+0.0	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	+0.0	+0.3	-0.7	+0.1
carbon source	D-Glucose 16.67 mM (C)	-0.5	-0.3	+0.3	-0.0	-0.0
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-0.2	+0.4	-0.6	+0.1	-0.2
carbon source	D-Fructose 16.67 mM (C)	-0.4	-0.2	+0.3	-0.1	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.1	+0.4	-0.6	-0.2	+0.1
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-0.3	+0.4	-0.2	-0.1	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.1	+0.3	-0.4	-0.4	+0.2
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	+0.3	+0.2	-0.5	-0.0	-0.1
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+0.4	-0.5	-0.1	+0.1	+0.1
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	+0.2	-0.3	-0.1	+0.1	+0.2
in planta xylem	Xylemvessel barcodes T0L1P3	-0.5	+0.2	+0.2	+0.0	+0.2
in planta xylem	Xylemvessel barcodes T0L2P4	+0.2	-0.2	-0.3	+0.3	+0.2
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	+0.1	-0.5	+0.7	+0.1	-0.1
control	PBS control	+0.3	-0.1	-0.3	+0.3	+0.1
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	+0.2	-0.1	-0.2	+0.2	+0.2
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	+0.0	+0.3	+0.4	-0.1	-0.3
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	+0.2	+0.2	+0.4	-0.1	-0.1
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	+0.2	-0.1	+0.2	+0.3	-0.1
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.1	+0.1	+0.8	-0.0	-0.1
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.1	+0.2	+0.4	+0.0	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.6	+0.2	+0.1	-0.0
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	+0.0	+0.4	+0.5	-0.0	-0.1
clovis xylem sap	Clovis xylem sap	+0.3	+0.2	+0.6	-0.0	-0.1
in planta xylem	Xylemvessel barcodes T1L3P4	+0.2	-0.0	+0.4	+0.4	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.0	+0.4	+0.6	+0.0	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	+0.3	+0.7	-0.0	+0.1
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	+0.1	+0.7	+0.5	-0.0	-0.0