Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.2089.1	Xcc-8004.2091.1	Xcc-8004.2092.1	Xcc-8004.2093.1	Xcc-8004.2094.1
in planta xylem	Xylemvessel barcodes T0L2P4	+0.2	-0.3	N.D.	N.D.	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	-0.4	N.D.	N.D.	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.6	+0.0	N.D.	N.D.	-0.5
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	+0.8	-0.2	N.D.	N.D.	-0.3
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	+0.7	-0.3	N.D.	N.D.	-0.1
in planta xylem	Xylemvessel barcodes T0L1P4	+0.7	+0.5	N.D.	N.D.	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.3	+0.8	N.D.	N.D.	-0.7
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.3	-0.0	N.D.	N.D.	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.7	+0.3	N.D.	N.D.	-0.3
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	+1.0	-0.1	N.D.	N.D.	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.9	+0.1	N.D.	N.D.	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.7	+0.5	N.D.	N.D.	-0.2
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	+1.3	+0.2	N.D.	N.D.	-0.4
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	+0.6	+0.3	N.D.	N.D.	+0.1
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+0.7	+0.6	N.D.	N.D.	-0.2
carbon source	D-Fructose 16.67 mM (C)	+1.1	+0.1	N.D.	N.D.	-0.1
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	+0.5	+0.5	N.D.	N.D.	+0.1
carbon source	Citric Acid 10mM (C)	+1.7	-0.1	N.D.	N.D.	-0.4
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+1.0	+0.3	N.D.	N.D.	-0.1
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	+0.8	+0.3	N.D.	N.D.	+0.1
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	+1.2	+0.5	N.D.	N.D.	-0.3
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	+0.9	+0.1	N.D.	N.D.	+0.3
clovis xylem sap	Clovis xylem sap	+0.6	+0.4	N.D.	N.D.	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.0	+0.5	N.D.	N.D.	-0.1
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	+1.2	+0.2	N.D.	N.D.	+0.2
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	+0.6	+0.8	N.D.	N.D.	+0.2
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	+1.2	+0.8	N.D.	N.D.	-0.1
carbon source	Pectin from apple 2 g/L (C)	+1.4	+0.5	N.D.	N.D.	+0.1
carbon source	D-Glucose 16.67 mM (C)	+1.7	+0.2	N.D.	N.D.	+0.1
carbon source	Citric Acid 16.67 mM (C)	+3.3	+0.5	N.D.	N.D.	-0.1