Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

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500 ntXcc-8004.1966.1 and Xcc-8004.1967.1 overlap by 4 nucleotidesXcc-8004.1967.1 and Xcc-8004.1968.1 are separated by 201 nucleotidesXcc-8004.1968.1 and Xcc-8004.1969.1 overlap by 4 nucleotidesXcc-8004.1969.1 and Xcc-8004.1970.1 are separated by 114 nucleotides Xcc-8004.1966.1: Xcc-8004.1966.1 - putative; ORF located using Glimmer/Genemark, at 1,895,140 to 1,895,658 Xcc-8004.1966.1 Xcc-8004.1967.1: Xcc-8004.1967.1 - Tryptophan synthase alpha chain (EC 4.2.1.20), at 1,895,655 to 1,896,473 Xcc-8004.1967.1 Xcc-8004.1968.1: Xcc-8004.1968.1 - Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2), at 1,896,675 to 1,897,562 Xcc-8004.1968.1 Xcc-8004.1969.1: Xcc-8004.1969.1 - Phosphoglucosamine mutase (EC 5.4.2.10), at 1,897,559 to 1,898,908 Xcc-8004.1969.1 Xcc-8004.1970.1: Xcc-8004.1970.1 - Oxidoreductase, at 1,899,023 to 1,899,961 Xcc-8004.1970.1
Group Condition Xcc-8004.1966.1 Xcc-8004.1967.1 Xcc-8004.1968.1 Xcc-8004.1969.1 Xcc-8004.1970.1
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) -1.5 -4.7 N.D. N.D. +0.1
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -1.9 -3.7 N.D. N.D. -0.4
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -0.8 -5.3 N.D. N.D. +0.3
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.8 -4.2 N.D. N.D. -0.3
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.9 -4.0 N.D. N.D. -0.2
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.5 -4.4 N.D. N.D. -0.2
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH -0.9 -4.3 N.D. N.D. +0.1
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.7 -4.3 N.D. N.D. +0.1
carbon source D-Glucose 16.67 mM (C) -0.2 -4.4 N.D. N.D. -0.1
carbon source Citric Acid 16.67 mM (C) -1.2 -3.9 N.D. N.D. +0.3
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -1.1 -3.5 N.D. N.D. -0.2
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -0.8 -3.7 N.D. N.D. -0.1
carbon source D-Fructose 16.67 mM (C) -0.4 -4.1 N.D. N.D. -0.1
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.5 -3.9 N.D. N.D. -0.1
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.9 -3.6 N.D. N.D. +0.0
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.9 -2.8 N.D. N.D. -0.3
carbon source Citric Acid 10mM (C) -0.4 -3.6 N.D. N.D. +0.4
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -1.5 -1.9 N.D. N.D. -0.1
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.5 -2.6 N.D. N.D. -0.3
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH -0.7 -2.6 N.D. N.D. -0.0
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -0.6 -2.5 N.D. N.D. -0.0
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -0.6 -2.3 N.D. N.D. -0.2
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -1.0 -2.1 N.D. N.D. +0.1
carbon source Pectin from apple 2 g/L (C) -0.5 -2.4 N.D. N.D. -0.1
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH -0.2 -2.6 N.D. N.D. -0.1
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -0.8 -1.8 N.D. N.D. -0.3
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -1.0 -2.0 N.D. N.D. +0.1
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -0.2 -2.2 N.D. N.D. -0.1
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH -0.4 -1.8 N.D. N.D. -0.0
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.4 -1.6 N.D. N.D. +0.1
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