Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

Group	Condition	Xcc-8004.1682.1	Xcc-8004.1683.1	Xcc-8004.1684.1	Xcc-8004.1685.1	Xcc-8004.1686.1
carbon source	Citric Acid 16.67 mM (C)	-0.3	+0.2	-0.6	-2.0	N.D.
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-1.2	-0.0	+0.0	-1.5	N.D.
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	-0.0	+0.1	+0.3	-1.8	N.D.
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-0.4	+0.4	-0.5	-0.8	N.D.
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	+0.1	+0.3	-0.3	-1.4	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.4	-0.3	-1.2	N.D.
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	+0.1	-0.0	+0.5	-1.5	N.D.
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	+0.0	-0.0	+0.5	-1.2	N.D.
carbon source	Pectin from apple 2 g/L (C)	+0.1	+0.1	+0.2	-1.2	N.D.
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-0.2	+0.2	+0.3	-1.0	N.D.
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	+0.1	+0.1	+0.5	-1.0	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.7	+0.2	+0.0	+1.2	N.D.
in planta xylem	Xylemvessel barcodes T1L3P4	-0.1	+0.2	-0.3	+1.1	N.D.
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.3	-0.1	+0.3	+1.0	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.1	-0.3	+0.0	+1.4	N.D.
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-0.3	+0.4	-0.1	+1.1	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	-0.1	-0.3	+2.1	N.D.
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-0.0	-0.3	+0.6	+0.9	N.D.
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	-0.2	-0.0	+0.2	+1.3	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.2	-0.0	-0.0	+1.5	N.D.
moka	MOKA	-0.1	-0.0	+0.2	+1.3	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	-0.1	+0.6	+0.7	N.D.
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	+0.4	+0.5	+0.9	-0.3	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	-0.4	+1.1	+0.6	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	-0.1	+0.3	+1.4	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.0	-0.1	+0.4	+1.2	N.D.
in planta xylem	Xylemvessel barcodes T0L1P4	+0.1	-0.3	+0.5	+1.4	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	-0.1	+0.7	+1.1	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.3	+0.2	+1.1	+2.0	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	-0.2	+0.3	+3.7	N.D.