Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.1657.1	Xcc-8004.1658.1	Xcc-8004.1659.1	Xcc-8004.1660.1	Xcc-8004.1661.1
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.8	-1.5	N.D.	-3.5	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.8	-0.4	N.D.	-4.2	+0.3
carbon source	Pectin from apple 2 g/L (C)	-0.7	-2.5	N.D.	-0.5	-0.6
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-1.3	-1.7	N.D.	-0.5	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	-0.6	N.D.	-4.4	+0.7
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-0.8	-1.6	N.D.	-2.6	+1.0
in planta xylem	Xylemvessel barcodes T0L1P4	+0.2	-0.6	N.D.	-4.2	+1.0
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-1.5	-1.7	N.D.	-0.1	-0.3
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-0.3	-1.7	N.D.	-2.2	+0.6
carbon source	D-Glucose 16.67 mM (C)	-0.1	-3.0	N.D.	-0.3	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.7	-0.1	N.D.	-4.4	+0.3
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-0.4	-2.1	N.D.	-0.2	-0.5
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.3	-1.8	N.D.	-1.7	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.1	-0.5	N.D.	-2.5	+0.3
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-0.8	-1.0	N.D.	-1.1	+0.1
carbon source	Citric Acid 16.67 mM (C)	-2.0	-1.5	N.D.	-0.5	+1.2
carbon source	D-Fructose 16.67 mM (C)	+0.2	-2.9	N.D.	-0.3	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	-0.3	N.D.	-2.6	+0.2
in planta xylem	Xylemvessel barcodes T1L3P4	-0.3	-0.4	N.D.	-2.4	+0.5
carbon source	Citric Acid 10mM (C)	+0.1	-2.4	N.D.	-0.3	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.2	-0.7	N.D.	-1.8	+0.1
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	+1.6	-0.6	N.D.	-2.4	-0.6
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-0.2	-1.7	N.D.	-0.4	+0.4
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-0.2	-0.6	N.D.	+0.6	-1.5
in planta xylem	Xylemvessel barcodes T0L2P4	-0.1	-0.4	N.D.	-1.6	+0.7
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.6	-0.9	N.D.	+0.8	-0.7
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-0.4	-1.3	N.D.	+1.1	-0.6
clovis xylem sap	Clovis xylem sap	+0.3	-1.5	N.D.	-0.4	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.9	-0.9	N.D.	+0.9	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.9	-0.6	N.D.	-0.5	+1.0