Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

Group	Condition	Xcc-8004.1638.1	Xcc-8004.1639.1	Xcc-8004.1640.1	Xcc-8004.1641.1	Xcc-8004.1642.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	-0.5	-0.3	-0.2	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	N.D.	-0.1	-0.3	-0.6	N.D.
in planta xylem	Xylemvessel barcodes T0L1P4	N.D.	-0.5	-0.1	-0.4	N.D.
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	N.D.	+0.5	-1.0	-0.4	N.D.
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	N.D.	-0.2	-0.3	-0.4	N.D.
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	N.D.	-0.2	-0.4	-0.3	N.D.
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	N.D.	-0.9	-0.5	+0.6	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	-0.4	-0.2	-0.2	N.D.
carbon source	Citric Acid 10mM (C)	N.D.	-0.9	+0.2	+0.0	N.D.
in planta xylem	Xylemvessel barcodes T1L3P4	N.D.	-0.3	+0.3	-0.4	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	+0.2	-0.3	-0.3	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	-0.4	-0.4	+0.4	N.D.
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	N.D.	-0.2	-0.3	+0.3	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.3	-0.4	-0.2	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.3	+0.0	-0.6	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	N.D.	+0.3	-0.1	-0.4	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+0.5	-0.3	-0.3	N.D.
in planta xylem	Xylemvessel barcodes T0L1P3	N.D.	-0.5	-0.1	+0.5	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	+0.6	-0.1	-0.4	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	+0.6	-0.4	-0.0	N.D.
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	N.D.	+0.3	+0.4	-0.6	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	+0.2	-0.4	+0.3	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	+0.5	-0.2	-0.1	N.D.
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	N.D.	+0.5	-0.3	+0.2	N.D.
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	N.D.	+0.5	+0.2	-0.2	N.D.
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	N.D.	+0.3	+0.5	-0.1	N.D.
carbon source	Citric Acid 16.67 mM (C)	N.D.	+0.1	+0.6	-0.1	N.D.
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	N.D.	-0.1	+0.2	+0.7	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	+0.6	-0.0	+0.3	N.D.
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	N.D.	+0.6	+0.2	+0.3	N.D.