Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.1436.1	Xcc-8004.1437.1	Xcc-8004.1438.1	Xcc-8004.1439.1	Xcc-8004.1440.1
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-3.1	-2.1	-0.2	N.D.	-0.7
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-3.1	-2.8	+0.1	N.D.	-0.1
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-1.7	-2.3	-0.4	N.D.	-0.7
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	-2.0	-2.5	+0.1	N.D.	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-3.1	-1.7	-0.0	N.D.	+0.1
in planta xylem	Xylemvessel barcodes T0L1P4	-2.7	-2.2	+0.1	N.D.	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.9	-1.3	-0.0	N.D.	-0.4
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-2.1	-2.1	+0.0	N.D.	-0.4
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-3.4	-1.5	+0.1	N.D.	+0.2
clovis xylem sap	Clovis xylem sap	-2.9	-1.5	-0.1	N.D.	-0.0
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-1.7	-2.5	-0.1	N.D.	-0.3
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-1.9	-2.2	-0.2	N.D.	-0.2
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-1.7	-2.3	-0.1	N.D.	-0.2
in planta xylem	Xylemvessel barcodes T0L1P3	-2.5	-1.9	-0.0	N.D.	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-2.9	-1.5	+0.0	N.D.	+0.3
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-1.5	-2.3	+0.1	N.D.	-0.2
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-1.3	-2.2	-0.1	N.D.	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.8	-1.1	-0.0	N.D.	+0.1
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-2.0	-1.5	-0.0	N.D.	-0.1
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-2.1	-1.4	-0.1	N.D.	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-3.1	-0.3	-0.1	N.D.	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-3.3	-0.2	+0.1	N.D.	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-2.1	-1.7	-0.1	N.D.	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-3.0	-0.9	-0.1	N.D.	+0.3
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-2.2	-1.3	-0.1	N.D.	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-2.5	-1.1	+0.1	N.D.	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.4	-1.9	-0.1	N.D.	+0.3
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-2.2	-1.8	+0.3	N.D.	+0.7
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	+0.6	-2.5	-0.0	N.D.	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-2.2	-0.8	-0.0	N.D.	+0.5