Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.1331.1	Xcc-8004.1332.1	Xcc-8004.1334.1	Xcc-8004.1335.1	Xcc-8004.1336.1
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.3	-0.0	-4.0	N.D.	-3.3
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	+0.0	+0.4	-3.4	N.D.	-4.3
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	+0.1	+0.2	-5.3	N.D.	-1.2
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.1	-0.2	-3.0	N.D.	-2.3
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+0.1	+0.1	-1.9	N.D.	-3.2
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x	-0.2	-0.1	-0.7	N.D.	-3.5
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	-0.2	+0.4	-1.5	N.D.	-3.1
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-0.3	+0.1	-1.1	N.D.	-3.2
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-0.2	+0.5	-1.8	N.D.	-2.8
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x	-0.0	+0.1	-1.4	N.D.	-2.8
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	+0.0	+0.3	-0.8	N.D.	-3.5
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	-0.0	+0.4	-0.6	N.D.	-3.7
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-0.2	+0.1	-2.1	N.D.	-1.8
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	-0.0	+0.0	-0.4	N.D.	-3.5
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-0.0	+0.8	-0.7	N.D.	-3.9
control	PBS control	+0.1	-0.0	-0.7	N.D.	-3.1
control	PBS control	-0.1	-0.0	-0.5	N.D.	-3.0
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x	+0.0	+0.1	-0.2	N.D.	-3.4
control	PBS control	-0.1	+0.2	-0.3	N.D.	-3.3
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-0.2	+0.1	-2.2	N.D.	-1.2
carbon source	D-Fructose 16.67 mM (C)	-0.1	+0.6	-1.0	N.D.	-2.9
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	+0.1	+0.0	+0.1	N.D.	-3.6
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.0	-0.3	-0.5	N.D.	-2.6
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	-0.2	+0.2	+0.5	N.D.	-3.7
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	+0.0	+0.2	-0.1	N.D.	-3.0
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	+0.1	+0.3	-0.6	N.D.	-2.6
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-0.0	+0.3	-1.4	N.D.	-1.5
carbon source	D-Glucose 16.67 mM (C)	-0.0	+0.6	-0.9	N.D.	-2.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	+0.5	-2.2	N.D.	-0.1
carbon source	Citric Acid 16.67 mM (C)	+0.6	+2.8	+0.7	N.D.	-3.0