Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

Group	Condition	Xcc-8004.121.1	Xcc-8004.122.1	Xcc-8004.124.1	Xcc-8004.123.1	Xcc-8004.125.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.2	-0.1	-0.6	-0.2	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	-0.1	-0.4	-0.1	-0.4
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-0.3	-0.1	-0.3	+0.1	-0.2
carbon source	D-Fructose 16.67 mM (C)	-0.2	-0.1	-0.3	-0.2	+0.1
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.3	+0.2	-0.3	+0.0	-0.0
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	+0.2	-0.3	+0.1	-0.1	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.4	-0.2	+0.3	+0.1	-0.2
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	+0.1	-0.2	-0.2	+0.1	-0.1
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	+0.2	-0.2	-0.3	+0.0	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	-0.1	-0.2	+0.1	+0.0
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-0.3	+0.2	-0.2	+0.1	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	-0.3	+0.6	-0.1	-0.3
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	-0.2	-0.0	+0.4	+0.1	-0.1
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-0.4	+0.2	+0.2	+0.2	+0.0
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	+0.2	-0.1	+0.2	+0.1	-0.1
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	+0.1	+0.2	-0.2	-0.1	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	+0.0	+0.4	-0.1	-0.1
in planta xylem	Xylemvessel barcodes T0L2P4	-0.1	-0.2	+0.4	+0.2	+0.2
carbon source	Citric Acid 16.67 mM (C)	-0.1	+0.1	-0.1	+0.2	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.3	+0.1	+0.2	+0.1	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3	+0.1	+0.2	-0.0	-0.0
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	+0.7	-0.0	-0.2	-0.1	+0.3
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	+0.2	-0.1	+0.6	-0.1	-0.1
in planta xylem	Xylemvessel barcodes T0L1P3	+0.1	-0.0	+0.4	+0.2	+0.1
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	+0.2	+0.2	-0.1	+0.2	+0.4
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+0.3	+0.1	+0.2	+0.1	+0.1
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	+0.1	+0.3	-0.0	+0.2	+0.4
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	+0.1	+0.5	-0.0	+0.3	+0.1
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	+0.2	+0.1	+0.2	+0.3	+0.3
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	+0.4	+0.2	+0.0	+0.1	+0.4