Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.1200.1	Xcc-8004.1202.1	Xcc-8004.1203.1	Xcc-8004.1204.1	Xcc-8004.1205.1
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-2.4	N.D.	+0.2	-1.2	-3.1
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	+0.3	N.D.	+0.1	-1.1	-4.6
in planta xylem	Xylemvessel barcodes T0L2P4	-3.9	N.D.	+0.3	-0.7	-0.9
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-0.9	N.D.	+0.3	-1.1	-3.5
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	+1.5	N.D.	+0.3	-1.9	-4.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-2.8	N.D.	-0.4	-0.5	-0.8
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	+0.6	N.D.	+0.0	-0.5	-4.7
carbon source	Pectin from apple 2 g/L (C)	-0.7	N.D.	-0.2	+0.1	-3.7
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.3	N.D.	+0.3	-0.3	-4.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.5	N.D.	-0.2	-0.7	-1.7
r2a control	R2A control	-3.8	N.D.	-0.0	-0.0	-0.1
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-1.3	N.D.	+0.5	-0.2	-2.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.0	N.D.	-0.7	-0.8	-2.0
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-0.2	N.D.	+0.3	-2.4	-1.1
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	-0.4	N.D.	-0.2	-0.6	-2.0
carbon source	Citric Acid 10mM (C)	+0.7	N.D.	+0.2	-1.0	-3.1
clovis xylem sap	Clovis xylem sap	+0.0	N.D.	+0.1	-0.5	-2.7
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+0.9	N.D.	-0.0	-1.0	-2.9
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-1.0	N.D.	+0.1	+0.1	-2.2
carbon source	Citric Acid 16.67 mM (C)	+0.6	N.D.	-0.0	+0.3	-3.8
in planta xylem	Xylemvessel barcodes T0L1P4	-0.5	N.D.	+0.4	-0.5	-2.3
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	+1.4	N.D.	-0.0	-0.9	-3.3
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	+0.6	N.D.	+0.4	-0.5	-2.9
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	+1.4	N.D.	+0.0	+0.2	-3.8
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	+0.8	N.D.	+0.6	-0.1	-3.4
carbon source	D-Glucose 16.67 mM (C)	-0.0	N.D.	+0.2	+0.5	-2.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	N.D.	+0.1	+0.5	-2.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.0	N.D.	+0.1	+1.5	-1.1
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	+0.9	N.D.	+0.0	+0.3	-1.8
in planta xylem	Xylemvessel barcodes T1L3P4	+0.8	N.D.	+0.4	-1.3	+0.7