Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.1128.1	Xcc-8004.1129.1	Xcc-8004.1130.1	Xcc-8004.1132.1	Xcc-8004.1133.1
in planta xylem	Xylemvessel barcodes T0L1P3	N.D.	+0.1	-0.1	-5.5	+0.4
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	N.D.	-0.4	-0.1	-2.3	-1.7
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	N.D.	+0.1	+0.1	-4.5	+0.2
carbon source	Citric Acid 10mM (C)	N.D.	+0.1	+0.1	-2.0	-1.2
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	N.D.	-0.1	-0.0	-2.0	-0.6
in planta xylem	Xylemvessel barcodes T0L1P4	N.D.	+0.2	-0.2	-0.4	-2.3
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	N.D.	-0.0	-0.3	-1.6	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	N.D.	+0.0	+0.1	+0.3	-2.8
carbon source	D-Fructose 16.67 mM (C)	N.D.	-0.0	+0.0	-1.4	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	+0.3	+0.2	-2.1	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.1	-0.1	-0.1	-1.7
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	N.D.	-0.1	+0.1	-1.1	-0.9
carbon source	D-Glucose 16.67 mM (C)	N.D.	+0.1	+0.2	-1.9	-0.4
carbon source	Pectin from apple 2 g/L (C)	N.D.	+0.1	+0.0	-0.9	-1.2
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	N.D.	-0.0	+0.0	-1.1	-0.9
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	N.D.	+0.0	+0.3	-0.5	-1.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.2	+0.1	-1.0	-0.7
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	N.D.	+0.0	-0.0	-1.6	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	-0.1	+0.1	-1.3	-0.5
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	N.D.	+0.2	+0.2	-0.6	-1.5
carbon source	Citric Acid 16.67 mM (C)	N.D.	-0.0	-0.0	-1.5	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+0.0	-0.0	+0.2	-1.5
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	N.D.	-0.2	+0.2	+0.4	-1.5
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	N.D.	+0.2	+0.2	-0.4	-1.0
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	N.D.	+0.3	-0.3	-1.7	+0.9
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	N.D.	-0.1	+0.7	-0.9	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	N.D.	+0.2	-0.0	-2.2	+2.9
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	N.D.	+0.1	-0.1	+1.9	-1.0
control	PBS control	N.D.	-0.2	-0.2	+0.7	+0.9
control	PBS control	N.D.	+0.0	-0.1	+0.8	+0.9