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Protein
Homologs
Fitness for 5 genes in
Xanthomonas campestris pv. campestris strain 8004
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Xcc-8004.1008.1 and Xcc-8004.1009.1 are separated by 33 nucleotides
Xcc-8004.1009.1 and Xcc-8004.1010.1 overlap by 1 nucleotides
Xcc-8004.1010.1 and Xcc-8004.1012.1 are separated by 46 nucleotides
Xcc-8004.1012.1 and Xcc-8004.1013.1 are separated by 211 nucleotides
Xcc-8004.1008.1: Xcc-8004.1008.1 - FIG01211317: hypothetical protein, at 953,427 to 954,122
Xcc-8004.1008.1
Xcc-8004.1009.1: Xcc-8004.1009.1 - Lysophospholipase L1 and related esterases, at 954,156 to 954,779
Xcc-8004.1009.1
Xcc-8004.1010.1: Xcc-8004.1010.1 - Aspartate aminotransferase (EC 2.6.1.1), at 954,779 to 956,050
Xcc-8004.1010.1
Xcc-8004.1012.1: Xcc-8004.1012.1 - hypothetical protein, at 956,097 to 956,879
Xcc-8004.1012.1
Xcc-8004.1013.1: Xcc-8004.1013.1 - Probable GTPase related to EngC, at 957,091 to 958,182
Xcc-8004.1013.1
Group
Condition
Xcc-8004.1008.1
Xcc-8004.1009.1
Xcc-8004.1010.1
Xcc-8004.1012.1
Xcc-8004.1013.1
in planta xylem
Xylemvessel barcodes Location 3 6 dpi (25 plantes)
-0.9
-1.9
-3.0
+0.3
N.D.
in planta
1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)
-0.2
-1.8
-3.3
+0.2
N.D.
carbon source
Citric Acid 16.67 mM (C)
+0.2
-0.6
-4.3
-0.4
N.D.
carbon source
D-Fructose 16.67 mM (C)
+0.1
-0.5
-3.9
-0.3
N.D.
xantho_mme_glucose_dropout_lth
Xantho_MME_glucose_dropout_LTH
+0.4
-0.8
-4.4
+0.2
N.D.
xantho_mme_glucose_dropout_lth
Xantho_MME_glucose_dropout_LTH
+0.2
-0.4
-4.3
-0.0
N.D.
xantho_mme_glucose_dropout_lth
Xantho_MME_glucose_dropout_LTH
-0.0
-0.7
-3.7
+0.0
N.D.
carbon source
D-Glucose 16.67 mM (C)
+0.1
+0.1
-4.3
-0.0
N.D.
in planta xylem
Xylemvessel barcodes Location 3 6 dpi (25 plantes)
-0.1
+0.3
-4.3
+0.1
N.D.
in planta xylem
Xylemvessel barcodes Location 3 4 dpi (25 plantes)
+0.5
-0.8
-3.0
-0.1
N.D.
xantho_mme_glucose_dropout_lth
Xantho_MME_glucose_dropout_LTH
-0.3
+0.4
-3.5
+0.1
N.D.
in planta mesophyll
Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days
+0.4
+0.2
-3.5
-0.4
N.D.
in planta xylem
Xylemvessel barcodes T1L3P4
+0.1
-2.9
-0.3
-0.1
N.D.
clovis xylem sap
Clovis xylem sap
-0.3
+0.1
-2.9
-0.1
N.D.
in planta mesophyll
Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days
+0.3
-0.9
-2.2
-0.2
N.D.
in planta xylem
Xylemvessel barcodes Location 3 4 dpi (25 plantes)
-0.6
-0.3
-2.3
+0.2
N.D.
carbon source
Citric Acid 10mM (C)
+0.3
-0.3
-3.0
+0.1
N.D.
in planta xylem
Xylemvessel barcodes Location 2 6 dpi (25 plantes)
+0.4
-0.3
-2.6
-0.3
N.D.
in planta xylem
Xylemvessel barcodes Location 2 6 dpi (25 plantes)
-0.1
+0.4
-2.4
-0.3
N.D.
in planta
1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)
-0.2
+0.4
-2.7
+0.2
N.D.
in planta
1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)
+0.1
-0.2
-1.9
-0.3
N.D.
in planta mesophyll
Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days
+0.0
-0.3
-1.9
-0.1
N.D.
in planta xylem
Xylemvessel barcodes Location 2 4 dpi (25 plantes)
+0.0
-0.8
-1.7
+0.2
N.D.
carbon source
Pectin from apple 2 g/L (C)
+0.0
-0.1
-2.4
+0.3
N.D.
in planta xylem
Xylemvessel barcodes Location 2 4 dpi (25 plantes)
+0.3
-0.5
-1.9
-0.2
N.D.
in planta mesophyll
Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days
-0.1
+0.8
-2.6
-0.3
N.D.
in planta xylem
Xylemvessel barcodes Location 2 6 dpi (25 plantes)
+0.1
-0.3
-1.3
+0.3
N.D.
in planta xylem
Xylemvessel barcodes Location 2 4 dpi (25 plantes)
+0.3
+0.2
-1.5
+0.0
N.D.
in planta
1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)
-0.1
+2.1
-2.2
-0.5
N.D.
in planta xylem
Xylemvessel barcodes Location 2 4 dpi (25 plantes)
+0.4
+0.2
-1.3
-0.0
N.D.
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