Fitness for 3 genes in Xanthomonas campestris pv. campestris strain 8004

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500 ntXcc-8004.1.1 and Xcc-8004.3.1 are separated by 275 nucleotidesXcc-8004.3.1 and Xcc-8004.4.1 are separated by 886 nucleotides Xcc-8004.1.1: Xcc-8004.1.1 - hypothetical protein, at 1 to 1,370 Xcc-8004.1.1 Xcc-8004.3.1: Xcc-8004.3.1 - DNA polymerase III beta subunit (EC 2.7.7.7), at 1,646 to 2,746 Xcc-8004.3.1 Xcc-8004.4.1: Xcc-8004.4.1 - DNA recombination and repair protein RecF, at 3,633 to 4,739 Xcc-8004.4.1
Group Condition Xcc-8004.1.1 Xcc-8004.3.1 Xcc-8004.4.1
carbon source D-Glucose 16.67 mM (C) N.D. N.D. -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -0.3
in planta xylem Xylemvessel barcodes T0L1P4 N.D. N.D. -0.3
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days N.D. N.D. -0.3
in planta xylem Xylemvessel barcodes T0L2P4 N.D. N.D. -0.3
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) N.D. N.D. -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -0.3
control PBS control N.D. N.D. -0.3
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) N.D. N.D. -0.3
carbon source D-Fructose 16.67 mM (C) N.D. N.D. -0.3
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X N.D. N.D. -0.2
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) N.D. N.D. -0.2
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X N.D. N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.2
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X N.D. N.D. -0.2
in planta xylem Xylemvessel barcodes T1L3P4 N.D. N.D. -0.2
carbon source Citric Acid 10mM (C) N.D. N.D. -0.2
in planta xylem Xylemvessel barcodes T0L1P3 N.D. N.D. -0.2
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X N.D. N.D. -0.2
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) N.D. N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -0.2
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X N.D. N.D. -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.2
supernatant Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x N.D. N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -0.2
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X N.D. N.D. -0.2
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