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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_025110 and TX73_025115 are separated by 26 nucleotides
TX73_025115 and TX73_025120 are separated by 126 nucleotides
TX73_025120 and TX73_025125 are separated by 167 nucleotides
TX73_025125 and TX73_025130 are separated by 365 nucleotides
TX73_025110: TX73_025110 - dienelactone hydrolase family protein, at 5,455,411 to 5,456,082
_025110
TX73_025115: TX73_025115 - polysaccharide export protein, at 5,456,109 to 5,456,759
_025115
TX73_025120: TX73_025120 - peptide-methionine (S)-S-oxide reductase MsrA, at 5,456,886 to 5,457,542
_025120
TX73_025125: TX73_025125 - hypothetical protein, at 5,457,710 to 5,458,027
_025125
TX73_025130: TX73_025130 - 30S ribosomal protein S20, at 5,458,393 to 5,458,659
_025130
Group
Condition
TX73
_025110
TX73
_025115
TX73
_025120
TX73
_025125
TX73
_025130
carbon source
MDC_bicarb with butyrate and Adenine
-0.3
+0.1
-0.0
-1.4
N.D.
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
-0.7
-0.3
-0.1
N.D.
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.0
-0.3
-0.1
-0.7
N.D.
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.1
-0.1
-0.0
-0.9
N.D.
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.1
+0.0
-0.1
-0.8
N.D.
carbon source
aspen wood chips that have been decomposed by a fungus (C)
-0.1
-0.4
+0.0
-0.6
N.D.
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
+0.1
-0.1
-0.9
N.D.
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.3
-0.5
-0.2
+0.1
N.D.
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.2
-0.7
-0.3
+0.3
N.D.
carbon source dark aerobic
PM with succinate aerobic in dark
-0.0
+0.1
-0.1
-0.9
N.D.
carbon source
MDC_bicarb with butyrate and Adenine
-0.2
+0.1
-0.1
-0.8
N.D.
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.2
-0.7
-0.1
+0.2
N.D.
sulfur source
NFM_No_Mo with acetate trihydrate
+0.1
+0.1
-0.1
-0.8
N.D.
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
+0.2
-0.1
-0.7
N.D.
carbon source
MDC_bicarb with butyrate and Adenine
-0.0
+0.3
-0.2
-0.8
N.D.
carbon source
MDC_bicarb with butyrate
-0.2
+0.4
-0.1
-0.7
N.D.
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.2
+0.4
-0.2
-0.6
N.D.
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.1
+0.4
-0.2
-0.6
N.D.
carbon source
MDC_bicarb with butyrate and Adenine
+0.0
+0.4
-0.2
-0.7
N.D.
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.2
-0.5
-0.0
+0.6
N.D.
carbon source
MDC_bicarb with butyrate
-0.1
+0.5
-0.0
-0.5
N.D.
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.1
-0.6
-0.1
+0.9
N.D.
carbon source
MDC_bicarb with butyrate
-0.1
+0.6
-0.1
-0.3
N.D.
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
+0.0
+0.7
+0.0
-0.4
N.D.
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.1
-0.2
-0.1
+0.9
N.D.
carbon source
MDC_bicarb with butyrate
-0.1
+0.9
-0.0
-0.3
N.D.
carbon source
PM with succinate anaerobic with light
-0.3
+0.4
-0.1
+0.5
N.D.
monoculture
OAcsForEtOH (C); monoculture
-0.0
+1.2
-0.0
-0.6
N.D.
monoculture
OAcsForEtOH (C); monoculture
+0.0
+0.9
+0.1
-0.4
N.D.
monoculture
OAcsForEtOH (C); monoculture
+0.0
+1.0
+0.1
-0.3
N.D.
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