Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_024895 and TX73_024900 overlap by 4 nucleotidesTX73_024900 and TX73_024905 are separated by 204 nucleotidesTX73_024905 and TX73_024910 are separated by 507 nucleotidesTX73_024910 and TX73_024915 are separated by 19 nucleotides TX73_024895: TX73_024895 - DUF3369 domain-containing protein, at 5,407,382 to 5,409,121 _024895 TX73_024900: TX73_024900 - response regulator, at 5,409,118 to 5,409,858 _024900 TX73_024905: TX73_024905 - sigma-70 family RNA polymerase sigma factor, at 5,410,063 to 5,410,674 _024905 TX73_024910: TX73_024910 - cytochrome ubiquinol oxidase subunit I, at 5,411,182 to 5,412,588 _024910 TX73_024915: TX73_024915 - cytochrome d ubiquinol oxidase subunit II, at 5,412,608 to 5,413,612 _024915
Group Condition TX73_024895 TX73_024900 TX73_024905 TX73_024910 TX73_024915
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.0 -0.3 -0.5 -0.3 -0.3
sulfur source NFM with pyruvate -0.1 -0.4 -0.3 -0.1 -0.3
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.2 -0.2 -0.4 -0.2 -0.2
stress L-Lactate (C) with 10 mM Sodium Chloride +0.0 -0.1 -0.5 -0.3 -0.3
stress L-Lactate (C) with 10 mM Sodium Chloride +0.0 -0.3 -0.3 -0.4 -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.1 -0.1 -0.3 -0.3 -0.1
sulfur source sodium isethionate sulfur source -0.1 -0.0 -0.2 -0.1 -0.4
stress L-Lactate (C) with 10 mM Sodium Chloride +0.1 -0.2 +0.0 -0.4 -0.3
carbon source PM with succinate and Sodium Formate anaerobic with light -0.3 -0.2 -0.1 -0.1 +0.0
carbon source MDC_bicarb with butyrate -0.1 -0.2 -0.1 -0.2 -0.1
carbon source PM with succinate anaerobic with light +0.0 -0.2 +0.0 -0.2 -0.3
sulfur source NFM with succinate +0.0 +0.0 -0.0 -0.4 -0.2
carbon source aspen wood chips that have been decomposed by a fungus (C) -0.1 -0.3 +0.1 -0.0 -0.2
sulfur source NFM with pyruvate -0.0 -0.2 +0.1 +0.1 -0.3
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.1 +0.2 +0.0 -0.2 -0.1
carbon source 4-Hydroxybenzoate (C) +0.0 +0.2 -0.2 -0.2 +0.2
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.2 +0.3 -0.0 -0.1 -0.1
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.2 +0.3 +0.0 -0.1 -0.1
carbon source MDC_bicarb with butyrate and Adenine +0.2 +0.4 +0.2 -0.2 -0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.3 +0.5 -0.1 +0.0 -0.1
sulfur source Dimethylsulfoniopropionate sulfur source +0.3 +0.5 -0.1 -0.0 -0.2
carbon source MDC_bicarb with butyrate and Adenine +0.4 +0.4 +0.2 -0.2 -0.2
sulfur source control Dimethyl sulfide sulfur source +0.2 +0.4 +0.0 -0.1 +0.0
survival starvation expt 4; 14 days; outgrowth in CAAc +0.2 +0.3 +0.1 +0.0 +0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.2 +0.4 +0.1 +0.1 +0.0
carbon source MDC_bicarb with butyrate and Adenine +0.3 +0.5 +0.3 -0.1 -0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.4 +0.6 +0.4 -0.3 -0.2
carbon source MDC_bicarb with butyrate and Adenine +0.3 +0.5 +0.4 -0.2 +0.2
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.4 +0.8 +0.4 -0.1 -0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.5 +0.5 +0.5 -0.1 -0.0
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