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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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500 nt
TX73_024675 and TX73_024680 overlap by 1 nucleotides
TX73_024680 and TX73_024685 are separated by 105 nucleotides
TX73_024685 and TX73_024690 are separated by 52 nucleotides
TX73_024690 and TX73_024695 are separated by 138 nucleotides
TX73_024675: TX73_024675 - FAD-binding protein, at 5,360,446 to 5,361,390
_024675
TX73_024680: TX73_024680 - electron transfer flavoprotein subunit beta/FixA family protein, at 5,361,390 to 5,362,139
_024680
TX73_024685: TX73_024685 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 5,362,245 to 5,362,817
_024685
TX73_024690: TX73_024690 - twin transmembrane helix small protein, at 5,362,870 to 5,363,064
_024690
TX73_024695: TX73_024695 - YihY/virulence factor BrkB family protein, at 5,363,203 to 5,364,096
_024695
Group
Condition
TX73
_024675
TX73
_024680
TX73
_024685
TX73
_024690
TX73
_024695
carbon source dark aerobic
PM with butyrate aerobic in dark
-4.5
N.D.
+0.0
+0.0
+0.1
sulfur source
Thiamine HCl sulfur source
-3.3
N.D.
-0.3
-0.4
-0.0
carbon source
Azelaic (C); anaerobic
-4.0
N.D.
+0.2
+0.0
-0.0
stress
PM_N2O butyrate and nitrate 0.1 mM
-4.0
N.D.
-0.1
+0.1
+0.3
stress
PM_argon75_N2O25 with buyrate and 0.1 mM nitrate; in dark
-4.1
N.D.
-0.1
+0.3
+0.1
carbon source
Citraconic (C); anaerobic
-3.6
N.D.
+0.1
-0.0
-0.1
carbon source
Citraconic (C); anaerobic
-3.7
N.D.
+0.1
+0.1
-0.2
carbon source
L-Leucine (C); anaerobic
-3.6
N.D.
+0.0
-0.2
+0.1
carbon source
Sebacic (C); anaerobic
-3.8
N.D.
+0.1
+0.2
-0.1
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-3.5
N.D.
+0.0
+0.0
-0.0
carbon source dark aerobic
PM with butyrate aerobic in dark
-4.1
N.D.
+0.1
+0.4
+0.1
stress
Benzoate (C), sodium fluoride stress
-3.0
N.D.
-0.0
-0.2
-0.1
stress
Benzoate (C), sodium fluoride stress
-3.0
N.D.
-0.2
+0.1
-0.0
carbon source
4-Hydroxybenzoate (C)
-3.1
N.D.
-0.1
+0.0
+0.0
stress
PM_N2O butyrate and nitrate 0.1 mM
-3.3
N.D.
+0.1
+0.2
-0.1
stress
PM_argon75_N2O25 butyrate and nitrate 0.1 mM
-3.1
N.D.
-0.1
+0.1
+0.1
carbon source
Citraconic (C); anaerobic
-2.7
N.D.
+0.1
-0.2
-0.1
carbon source
Pimelic (C); anaerobic
-3.2
N.D.
+0.3
+0.1
-0.1
stress
Benzoate (C), sodium fluoride stress
-3.0
N.D.
-0.0
-0.1
+0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
-3.0
N.D.
+0.1
+0.0
+0.0
carbon source
Sebacic (C); anaerobic
-2.9
N.D.
-0.0
+0.1
+0.0
stress
PM_argon75_N2O25 with buyrate and 0.1 mM nitrate; in dark
-2.9
N.D.
+0.0
+0.1
+0.1
stress
PM_argon75_N2O25 butyrate and nitrate 0.1 mM
-2.6
N.D.
-0.0
-0.1
+0.0
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
-3.0
N.D.
-0.1
+0.4
+0.2
carbon source
Butyric Acid (C); anaerobic
-2.3
N.D.
+0.1
-0.0
-0.2
carbon source
Azelaic (C); anaerobic
-2.7
N.D.
+0.2
+0.2
-0.0
carbon source
Pimelic (C); anaerobic
-2.4
N.D.
+0.0
+0.2
-0.0
carbon source
MDC_bicarb with butyrate
-2.8
N.D.
+0.4
+0.3
+0.1
carbon source
Pimelic (C); anaerobic
-2.1
N.D.
+0.1
+0.3
-0.1
sulfur source
NFM with pyruvate
+1.6
N.D.
-0.3
+0.4
-0.4
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