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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_024465 and TX73_024470 are separated by 188 nucleotides
TX73_024470 and TX73_024475 are separated by 123 nucleotides
TX73_024475 and TX73_024480 are separated by 53 nucleotides
TX73_024480 and TX73_024485 are separated by 244 nucleotides
TX73_024465: TX73_024465 - thioesterase family protein, at 5,310,697 to 5,311,470
_024465
TX73_024470: TX73_024470 - hypothetical protein, at 5,311,659 to 5,311,913
_024470
TX73_024475: TX73_024475 - hypothetical protein, at 5,312,037 to 5,312,765
_024475
TX73_024480: TX73_024480 - tetratricopeptide repeat protein, at 5,312,819 to 5,314,567
_024480
TX73_024485: TX73_024485 - peptidase, at 5,314,812 to 5,315,783
_024485
Group
Condition
TX73
_024465
TX73
_024470
TX73
_024475
TX73
_024480
TX73
_024485
carbon source
MDC_bicarb with butyrate
-0.2
-0.1
-0.2
-0.3
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.3
+0.4
-0.4
-0.3
-0.1
carbon source
MDC_bicarb with butyrate
-0.2
+0.1
-0.1
-0.2
-0.2
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.2
+0.1
-0.1
-0.2
-0.6
carbon source
MDC_bicarb with butyrate
-0.2
+0.4
-0.2
-0.1
-0.4
sulfur source control
Dimethyl sulfide sulfur source
+0.2
+0.1
-0.1
-0.3
-0.4
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
-0.2
+0.3
+0.1
-0.2
-0.4
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.2
-0.1
+0.1
-0.3
-0.4
sulfur source control
Dimethyl sulfide sulfur source
+0.1
+0.3
+0.1
-0.2
-0.5
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.1
+0.1
+0.2
-0.2
-0.4
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.3
+0.7
-0.2
-0.0
-0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.4
+0.4
+0.0
-0.1
+0.1
sulfur source control
sulfur source control
+0.4
-0.4
+0.1
-0.1
+0.1
sulfur source
Sulfoacetic sulfur source
+0.3
+0.1
+0.1
-0.1
-0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.0
+0.6
-0.4
+0.1
+0.0
sulfur source
NFM with pyruvate
+0.0
-0.3
-0.2
+0.2
+0.5
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
-0.3
+0.1
+0.1
+0.4
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.2
-0.1
-0.0
+0.3
+0.3
sulfur source
NFM with pyruvate
+0.6
-0.3
-0.4
+0.1
+0.3
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
+0.2
+0.1
-0.3
+0.1
+0.3
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
-0.1
-0.0
+0.2
+0.4
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.1
+0.1
-0.1
+0.1
+0.5
carbon source dark aerobic
PM with butyrate aerobic in dark
+0.2
-0.1
-0.2
+0.2
+0.5
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
-0.1
+0.1
+0.1
+0.4
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.2
+0.2
-0.0
+0.2
+0.4
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.2
+0.2
+0.1
-0.1
+0.3
sulfur source
NFM with succinate
+0.3
+0.3
+0.2
-0.1
+0.0
carbon source dark aerobic
PM with succinate aerobic in dark
-0.2
+0.2
+0.3
+0.3
+0.4
stress
PM_argon75_N2O25 with buyrate and 0.1 mM nitrate; in dark
+0.1
+0.2
+0.1
+0.1
+0.5
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
+0.0
+0.3
+0.1
+0.2
+0.4
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TX73_024475
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