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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_023755 and TX73_023760 are separated by 108 nucleotides
TX73_023760 and TX73_023765 are separated by 157 nucleotides
TX73_023765 and TX73_023770 overlap by 17 nucleotides
TX73_023770 and TX73_023775 overlap by 14 nucleotides
TX73_023755: TX73_023755 - hypothetical protein, at 5,154,548 to 5,155,036
_023755
TX73_023760: TX73_023760 - hypothetical protein, at 5,155,145 to 5,155,429
_023760
TX73_023765: TX73_023765 - ABC transporter ATP-binding protein, at 5,155,587 to 5,157,152
_023765
TX73_023770: TX73_023770 - ABC transporter permease, at 5,157,136 to 5,158,227
_023770
TX73_023775: TX73_023775 - ABC transporter permease, at 5,158,214 to 5,159,131
_023775
Group
Condition
TX73
_023755
TX73
_023760
TX73
_023765
TX73
_023770
TX73
_023775
carbon source
4-Aminobutyric (C); anaerobic
-0.5
-0.2
-0.1
-0.1
-0.1
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.3
-0.5
+0.0
-0.1
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
-0.3
-0.4
+0.1
-0.3
-0.0
carbon source dark aerobic
PM with succinate aerobic in dark
-0.3
-0.4
+0.1
-0.1
-0.2
carbon source
MDC_bicarb with butyrate and Adenine
-0.2
-0.5
+0.0
+0.0
-0.2
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.4
-0.3
-0.0
-0.0
+0.1
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.0
-0.5
+0.1
-0.3
-0.1
carbon source
Butyric Acid (C); anaerobic
-0.4
-0.3
+0.1
-0.0
+0.0
carbon source
4-Aminobutyric (C); anaerobic
-0.2
-0.5
+0.1
+0.0
-0.0
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.3
-0.3
-0.1
+0.1
+0.1
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.4
-0.4
+0.1
+0.1
+0.1
sulfur source control
sulfur source control
+0.2
-0.2
-0.2
-0.3
+0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.6
+0.2
-0.2
+0.2
+0.1
stress
PM_argon75_N2O25 butyrate and nitrate 0.1 mM
-0.4
-0.3
+0.1
+0.1
+0.1
sulfur source
NFM with pyruvate
-0.0
+0.4
+0.1
-0.7
-0.1
carbon source
Fumarate (C); anaerobic
-0.5
-0.1
+0.1
+0.2
+0.1
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.1
-0.4
+0.2
-0.1
+0.1
carbon source
Fumarate (C); anaerobic
-0.3
-0.2
+0.2
+0.1
+0.2
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.3
+0.3
-0.0
-0.2
+0.1
survival
starvation expt 4; 3 days; outgrowth in CAAc
-0.2
-0.2
+0.1
+0.3
+0.1
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.0
-0.4
+0.2
-0.0
+0.3
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.1
-0.2
+0.1
+0.2
+0.2
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.2
-0.1
+0.1
+0.3
+0.1
carbon source
Fumarate (C); anaerobic
+0.0
-0.3
+0.1
+0.3
+0.2
sulfur source
NFM with pyruvate
-0.4
+0.7
+0.1
+0.1
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.3
+0.5
+0.0
+0.0
+0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.2
+0.1
+0.2
+0.3
+0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
+0.5
+0.2
+0.3
-0.2
carbon source
PM with succinate and Sodium Formate anaerobic with light
-0.1
+0.2
+0.1
+0.3
+0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.2
+0.6
+0.1
+0.3
-0.1
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