Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_023385 and TX73_023390 are separated by 180 nucleotidesTX73_023390 and TX73_023395 are separated by 185 nucleotidesTX73_023395 and TX73_023400 are separated by 99 nucleotidesTX73_023400 and TX73_023405 are separated by 245 nucleotides TX73_023385: TX73_023385 - propionyl-CoA synthetase, at 5,081,848 to 5,083,758 _023385 TX73_023390: TX73_023390 - lysozyme inhibitor LprI family protein, at 5,083,939 to 5,084,685 _023390 TX73_023395: TX73_023395 - SDR family NAD(P)-dependent oxidoreductase, at 5,084,871 to 5,085,674 _023395 TX73_023400: TX73_023400 - radical SAM protein, at 5,085,774 to 5,087,549 _023400 TX73_023405: TX73_023405 - hypothetical protein, at 5,087,795 to 5,088,037 _023405
Group Condition TX73_023385 TX73_023390 TX73_023395 TX73_023400 TX73_023405
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.2 -0.0 -0.5 -0.2 -0.4
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.3 -0.2 -1.4 +0.2 +0.3
stress L-Lactate (C) with 10 mM Sodium Chloride -0.3 +0.1 -0.6 -0.2 -0.2
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.1 -0.3 -1.3 +0.2 +0.2
stress L-Lactate (C) with 10 mM Sodium Chloride -0.6 -0.2 -0.6 +0.1 +0.3
carbon source PM with succinate and Sodium Formate anaerobic with light +0.2 -0.1 -0.4 -0.1 -0.5
carbon source Sebacic (C); anaerobic -0.1 -0.2 -0.1 +0.0 -0.4
survival starvation expt 1; 7 days; outgrowth in CAAc -0.4 -0.2 +0.2 +0.0 -0.2
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.1 -0.2 -0.6 +0.0 +0.2
survival starvation expt 4; 7 days; outgrowth in CAAc -0.6 +0.1 +0.3 -0.0 -0.4
survival starvation expt 2; 7 days; outgrowth in CAAc -0.5 +0.0 +0.4 -0.0 -0.2
carbon source PM with succinate and Sodium Formate anaerobic with light +0.3 -0.1 -0.4 -0.0 -0.1
sulfur source NFM_No_Mo with acetate trihydrate -0.4 -0.2 +0.2 +0.0 +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride -0.5 -0.0 -0.3 +0.0 +0.6
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.1 +0.1 -0.4 -0.1 +0.2
carbon source 4-Hydroxybenzoate (C) +0.9 -0.1 -0.1 -0.0 -0.8
sulfur source control Dimethyl sulfide sulfur source -0.1 -0.1 +0.4 +0.1 -0.3
carbon source PM with succinate and Sodium Formate anaerobic with light +0.5 -0.2 -0.1 -0.2 +0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 -0.1 -0.3 +0.1 +0.4
survival starvation expt 2; 14 days; outgrowth in CAAc -0.2 -0.0 +0.5 +0.1 -0.2
carbon source 4-Hydroxybenzoate (C) +0.7 -0.1 -0.6 +0.1 +0.1
carbon source MDC_bicarb with butyrate +0.8 -0.2 -0.5 -0.2 +0.3
carbon source 4-Hydroxybenzoate (C) +0.8 -0.2 -0.4 +0.2 -0.1
carbon source L-Leucine (C); anaerobic +0.3 -0.2 -0.1 -0.0 +0.3
carbon source MDC_bicarb with butyrate +0.8 -0.3 -0.3 -0.0 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.0 +0.2 -0.4 +0.1 +0.5
carbon source MDC_bicarb with butyrate +1.0 -0.3 -0.1 -0.1 -0.0
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 +0.1 -0.4 +0.0 +0.8
sulfur source NFM with pyruvate +0.1 +0.1 +0.4 +0.1 +0.4
sulfur source NFM with pyruvate +0.2 +0.5 +0.6 +0.2 +1.0
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TX73_023385
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TX73_023390
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