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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_023370 and TX73_023375 are separated by 133 nucleotides
TX73_023375 and TX73_023380 are separated by 232 nucleotides
TX73_023380 and TX73_023385 are separated by 178 nucleotides
TX73_023385 and TX73_023390 are separated by 180 nucleotides
TX73_023370: TX73_023370 - alkylphosphonate utilization protein, at 5,080,135 to 5,080,353
_023370
TX73_023375: TX73_023375 - OmpW family protein, at 5,080,487 to 5,081,176
_023375
TX73_023380: TX73_023380 - hypothetical protein, at 5,081,409 to 5,081,669
_023380
TX73_023385: TX73_023385 - propionyl-CoA synthetase, at 5,081,848 to 5,083,758
_023385
TX73_023390: TX73_023390 - lysozyme inhibitor LprI family protein, at 5,083,939 to 5,084,685
_023390
Group
Condition
TX73
_023370
TX73
_023375
TX73
_023380
TX73
_023385
TX73
_023390
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.5
-0.1
-0.3
-0.1
-0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.5
-0.1
-0.4
-0.0
+0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.8
-0.0
+0.4
-0.5
-0.0
survival
starvation expt 1; 7 days; outgrowth in CAAc
-0.1
-0.1
-0.0
-0.4
-0.2
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.2
-0.2
-0.2
-0.1
-0.1
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.4
-0.0
+0.1
-0.2
-0.2
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.3
-0.2
-0.0
+0.1
-0.3
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.2
-0.1
+0.1
-0.3
-0.2
sulfur source
NFM_No_Mo_Plus_VCl3 with acetate trihydrate
-0.1
+0.1
-0.2
-0.4
+0.0
carbon source
PM with succinate and Sodium Formate anaerobic with light
-0.4
-0.3
-0.1
+0.3
-0.1
sulfur source
NFM_No_Mo with acetate trihydrate
+0.0
+0.2
-0.2
-0.4
-0.2
sulfur source
NFM with pyruvate
-1.2
+0.3
-0.5
+0.2
+0.5
sulfur source
Thiamine HCl sulfur source
-0.4
+0.1
-0.4
+0.1
+0.1
carbon source dark aerobic
PM with succinate aerobic in dark
-0.7
+0.1
+0.1
+0.1
-0.1
sulfur source
NFM_No_Mo with acetate trihydrate
+0.1
+0.1
-0.3
-0.3
-0.1
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.1
-0.2
-0.1
-0.4
+0.1
carbon source
Azelaic (C); anaerobic
-0.3
-0.2
+0.3
-0.1
+0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.2
+0.1
+0.2
-0.6
-0.2
sulfur source
NFM with pyruvate
-0.4
+0.4
-0.3
+0.1
+0.1
sulfur source
Sulfoacetic sulfur source
+0.4
-0.2
+0.1
-0.2
-0.1
carbon source
PM with succinate and Sodium Formate anaerobic with light
-0.2
+0.0
-0.1
+0.5
-0.2
carbon source
MDC_bicarb with butyrate
-0.4
-0.1
+0.0
+0.8
-0.3
sulfur source
sodium isethionate sulfur source
+0.3
-0.3
-0.1
+0.3
-0.1
carbon source
MDC_bicarb with butyrate
-0.1
-0.3
-0.0
+0.8
-0.2
carbon source
4-Hydroxybenzoate (C)
+0.1
-0.0
-0.1
+0.8
-0.2
carbon source
MDC_bicarb with butyrate
+0.4
-0.2
-0.2
+1.0
-0.3
carbon source
4-Hydroxybenzoate (C)
+0.1
-0.1
+0.1
+0.7
-0.1
carbon source
4-Hydroxybenzoate (C)
+0.1
-0.1
+0.0
+0.9
-0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.7
-0.0
-0.1
+0.1
+0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.6
+0.0
+0.4
-0.3
+0.1
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