Fitness for 5 genes in Rhodopseudomonas palustris CGA009

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 175 experiments or choose conditions or try the comparative fitness browser

500 ntTX73_023225 and TX73_023230 are separated by 38 nucleotidesTX73_023230 and TX73_023235 are separated by 76 nucleotidesTX73_023235 and TX73_023240 overlap by 86 nucleotidesTX73_023240 and TX73_023245 are separated by 231 nucleotides TX73_023225: TX73_023225 - thioredoxin fold domain-containing protein, at 5,046,454 to 5,046,858 _023225 TX73_023230: TX73_023230 - metalloregulator ArsR/SmtB family transcription factor, at 5,046,897 to 5,047,271 _023230 TX73_023235: TX73_023235 - YeeE/YedE family protein, at 5,047,348 to 5,048,550 _023235 TX73_023240: TX73_023240 - DsrE family protein, at 5,048,465 to 5,048,917 _023240 TX73_023245: TX73_023245 - YeeE/YedE family protein, at 5,049,149 to 5,050,198 _023245
Group Condition TX73_023225 TX73_023230 TX73_023235 TX73_023240 TX73_023245
carbon source 4-Hydroxybenzoate (C) -2.1 +0.2 -4.4 +0.1 -0.3
carbon source 4-Hydroxybenzoate (C) -1.9 +0.4 -4.2 +0.1 -0.3
carbon source 4-Hydroxybenzoate (C) -2.0 +0.5 -3.7 +0.1 -0.4
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -2.5 +1.8 -2.9 -0.8 +0.3
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.9 +2.0 -2.9 -0.9 +0.1
carbon source dark aerobic PM with succinate aerobic in dark +0.1 -2.0 -0.0 -0.1 -0.1
sulfur source sodium isethionate sulfur source -0.2 -1.5 +0.2 -0.8 +0.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.5 +1.8 -2.5 -0.8 +0.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.6 +1.5 -2.1 -0.7 +0.1
carbon source 4-Aminobutyric (C); anaerobic -1.0 +0.7 -1.7 +0.4 -0.2
carbon source 4-Aminobutyric (C); anaerobic -1.1 +0.5 -1.5 +0.5 -0.2
carbon source dark aerobic PM with butyrate aerobic in dark -0.1 -1.7 +0.2 -0.3 +0.2
carbon source Citraconic (C); anaerobic -0.1 -1.1 -0.3 +0.0 -0.0
carbon source 4-Aminobutyric (C); anaerobic -0.6 +0.6 -2.0 +0.5 +0.1
carbon source 4-Aminobutyric (C); anaerobic -0.5 +0.7 -1.7 +0.3 -0.2
sulfur source NFM with pyruvate +0.4 -1.9 +0.5 -0.2 +0.0
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.6 +1.3 -0.5 -0.5 +0.0
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.5 +1.1 -0.5 -0.3 +0.1
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.7 +1.2 -0.4 -0.1 -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.4 -0.7 +0.4 +0.4 -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.4 -0.4 +0.3 +0.3 -0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.4 -0.3 -0.2 +0.7 -0.0
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.2 +1.2 -0.3 -0.0 +0.1
sulfur source NFM with pyruvate +0.2 -0.5 +0.5 +0.5 +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.9 +0.2 -0.4 +0.1 +0.1
carbon source Azelaic (C); anaerobic +0.3 +0.5 -0.2 +0.5 +0.0
stress L-Lactate (C) with 10 mM Sodium Chloride +0.7 -0.8 +0.1 +0.7 +0.4
survival starvation expt 3; 3 days; outgrowth in CAAc +0.1 +0.8 -0.0 +0.6 -0.1
carbon source Fumarate (C); anaerobic +0.3 +0.6 +0.1 +0.2 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.5 -0.1 +0.4 +0.6 +0.3
remove
TX73_023225
plot		 remove
TX73_023230
plot		 remove
TX73_023235		 remove
TX73_023240
plot		 remove
TX73_023245
plot