Fitness for 5 genes in Rhodopseudomonas palustris CGA009

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 175 experiments or choose conditions or try the comparative fitness browser

500 ntTX73_023215 and TX73_023220 are separated by 28 nucleotidesTX73_023220 and TX73_023225 are separated by 40 nucleotidesTX73_023225 and TX73_023230 are separated by 38 nucleotidesTX73_023230 and TX73_023235 are separated by 76 nucleotides TX73_023215: TX73_023215 - thioredoxin family protein, at 5,045,048 to 5,045,641 _023215 TX73_023220: TX73_023220 - cytochrome c biogenesis protein CcdA, at 5,045,670 to 5,046,413 _023220 TX73_023225: TX73_023225 - thioredoxin fold domain-containing protein, at 5,046,454 to 5,046,858 _023225 TX73_023230: TX73_023230 - metalloregulator ArsR/SmtB family transcription factor, at 5,046,897 to 5,047,271 _023230 TX73_023235: TX73_023235 - YeeE/YedE family protein, at 5,047,348 to 5,048,550 _023235
Group Condition TX73_023215 TX73_023220 TX73_023225 TX73_023230 TX73_023235
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -2.9 -3.3 -2.5 +1.8 -2.9
carbon source 4-Hydroxybenzoate (C) +0.1 -2.8 -2.1 +0.2 -4.4
carbon source 4-Hydroxybenzoate (C) -0.2 -3.1 -2.0 +0.5 -3.7
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -2.5 -3.6 -0.9 +2.0 -2.9
carbon source 4-Hydroxybenzoate (C) +0.1 -2.3 -1.9 +0.4 -4.2
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -2.8 -3.0 -0.6 +1.5 -2.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -3.2 -2.5 -0.5 +1.8 -2.5
carbon source 4-Aminobutyric (C); anaerobic +0.0 -0.9 -1.0 +0.7 -1.7
carbon source 4-Aminobutyric (C); anaerobic +0.3 -1.0 -1.1 +0.5 -1.5
carbon source 4-Aminobutyric (C); anaerobic +0.3 -0.9 -0.6 +0.6 -2.0
carbon source dark aerobic PM with succinate aerobic in dark -0.2 -0.4 +0.1 -2.0 -0.0
carbon source 4-Aminobutyric (C); anaerobic +0.2 -1.0 -0.5 +0.7 -1.7
sulfur source sodium isethionate sulfur source +0.1 -0.6 -0.2 -1.5 +0.2
carbon source dark aerobic PM with butyrate aerobic in dark -0.2 -0.2 -0.1 -1.7 +0.2
carbon source Citraconic (C); anaerobic +0.0 -0.2 -0.1 -1.1 -0.3
sulfur source NFM with pyruvate -0.4 -0.1 +0.4 -1.9 +0.5
carbon source L-Leucine (C); anaerobic -0.1 -0.5 -0.2 -0.1 -0.4
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.2 -0.7 -0.5 +1.1 -0.5
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.3 -0.4 -0.7 +1.2 -0.4
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.3 -0.3 -0.6 +1.3 -0.5
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.1 +0.0 +0.4 -0.7 +0.4
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.0 -0.5 -0.2 +1.2 -0.3
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.2 -0.2 +0.4 -0.4 +0.3
stress L-Lactate (C) with 10 mM Sodium Chloride +0.1 -0.3 +0.9 +0.2 -0.4
carbon source MDC_bicarb with butyrate and Adenine +0.3 -0.2 -0.1 +0.7 -0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.4 +0.3 +0.7 -0.8 +0.1
sulfur source NFM with pyruvate +0.5 +0.0 +0.2 -0.5 +0.5
carbon source Azelaic (C); anaerobic +0.2 +0.2 +0.3 +0.5 -0.2
carbon source Fumarate (C); anaerobic +0.1 +0.2 +0.3 +0.6 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.7 -0.1 +0.5 -0.1 +0.4
remove
TX73_023215
plot		 remove
TX73_023220
plot		 remove
TX73_023225		 remove
TX73_023230
plot		 remove
TX73_023235
plot