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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_023130 and TX73_023135 are separated by 13 nucleotides
TX73_023135 and TX73_023140 are separated by 80 nucleotides
TX73_023140 and TX73_023145 are separated by 81 nucleotides
TX73_023145 and TX73_023150 are separated by 23 nucleotides
TX73_023130: TX73_023130 - hypothetical protein, at 5,030,962 to 5,031,480
_023130
TX73_023135: TX73_023135 - cadmium ABC transporter ATPase, at 5,031,494 to 5,031,673
_023135
TX73_023140: TX73_023140 - recombinase RecQ, at 5,031,754 to 5,032,293
_023140
TX73_023145: TX73_023145 - rhodanese-like domain-containing protein, at 5,032,375 to 5,032,764
_023145
TX73_023150: TX73_023150 - isoprenylcysteine carboxylmethyltransferase family protein, at 5,032,788 to 5,033,264
_023150
Group
Condition
TX73
_023130
TX73
_023135
TX73
_023140
TX73
_023145
TX73
_023150
sulfur source
NFM with pyruvate
+0.4
-0.8
-0.0
+0.8
-2.8
survival outgrowth control
starvation outgrowth control in CAAc
+0.2
-0.3
+0.1
-0.4
-0.4
carbon source
MDC_bicarb with butyrate and Adenine
+0.0
-0.7
-0.2
-0.1
+0.3
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.1
-0.4
+0.1
+0.1
-0.4
sulfur source
NFM with succinate
-0.0
-0.7
+0.2
+0.0
+0.3
carbon source
4-Aminobutyric (C); anaerobic
-0.2
-0.4
+0.3
+0.2
+0.0
carbon source
4-Aminobutyric (C); anaerobic
-0.1
-0.1
+0.3
+0.3
-0.4
carbon source
Citraconic (C); anaerobic
+0.4
-0.4
-0.1
+0.2
-0.2
sulfur source
sodium isethionate sulfur source
-0.2
+0.1
-0.5
+0.1
+0.5
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
-0.2
-0.2
+0.5
+0.0
sulfur source
Sulfoacetic sulfur source
-0.2
+0.6
-0.0
-0.3
-0.0
carbon source
L-Malic (C); anaerobic
-0.0
-0.2
+0.2
+0.4
-0.2
carbon source
Citraconic (C); anaerobic
+0.4
+0.3
-0.0
-0.1
-0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.4
-0.2
-0.5
+0.2
+0.3
carbon source
Butyric Acid (C); anaerobic
-0.0
+0.3
+0.0
+0.3
-0.3
carbon source
Butyric Acid (C); anaerobic
+0.0
-0.3
+0.3
+0.4
-0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.6
-0.1
-0.6
+0.3
+0.2
carbon source
MDC_bicarb with butyrate and Adenine
+0.2
-0.7
+0.2
+0.3
+0.5
carbon source
Sebacic (C); anaerobic
+0.1
-0.3
+0.3
+0.3
+0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
-0.3
+0.3
+0.3
+0.2
carbon source
Citraconic (C); anaerobic
+0.5
-0.0
+0.4
+0.2
-0.4
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.0
+0.3
+0.2
+0.7
-0.6
carbon source
MDC_bicarb with butyrate and Adenine
+0.1
+0.6
+0.2
-0.1
+0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.4
-0.1
-0.1
+0.5
+0.1
carbon source
MDC_bicarb with butyrate and Adenine
+0.2
+0.6
+0.4
-0.3
-0.1
carbon source
L-Leucine (C); anaerobic
+0.4
+0.2
+0.0
+0.3
-0.1
carbon source
Citraconic (C); anaerobic
+0.6
+0.1
+0.2
+0.3
-0.3
sulfur source
NFM with pyruvate
+0.1
+0.7
+0.0
+0.5
-0.2
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.5
+0.5
+0.0
-0.0
+0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.5
+0.1
-0.1
+0.7
+0.3
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