Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_022880 and TX73_022885 are separated by 21 nucleotidesTX73_022885 and TX73_022890 are separated by 111 nucleotidesTX73_022890 and TX73_022895 are separated by 106 nucleotidesTX73_022895 and TX73_022900 are separated by 391 nucleotides TX73_022880: TX73_022880 - efflux RND transporter permease subunit, at 4,970,296 to 4,973,433 _022880 TX73_022885: TX73_022885 - efflux RND transporter periplasmic adaptor subunit, at 4,973,455 to 4,974,558 _022885 TX73_022890: TX73_022890 - VOC family protein, at 4,974,670 to 4,975,149 _022890 TX73_022895: TX73_022895 - ATP-binding protein, at 4,975,256 to 4,977,877 _022895 TX73_022900: TX73_022900 - CsbD family protein, at 4,978,269 to 4,978,484 _022900
Group Condition TX73_022880 TX73_022885 TX73_022890 TX73_022895 TX73_022900
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.5 -0.3 -0.6 -0.5 -0.4
stress L-Lactate (C) with 10 mM Sodium Chloride -0.2 -0.3 -0.4 -0.6 -0.4
carbon source 4-Hydroxybenzoate (C) -0.0 +0.1 -0.2 -1.6 -0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.3 -0.4 -0.3 -0.5 -0.3
stress L-Lactate (C) with 10 mM Sodium Chloride -0.2 -0.0 -0.3 -0.4 -0.5
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.1 -0.1 -0.5 -0.5 -0.2
sulfur source Dimethylsulfoniopropionate sulfur source -0.1 -0.2 +0.1 -0.6 -0.3
carbon source 4-Hydroxybenzoate (C) -0.0 -0.0 -0.1 -1.0 -0.0
stress L-Lactate (C) with 10 mM Sodium Chloride -0.2 -0.1 -0.5 -0.2 -0.1
carbon source 4-Hydroxybenzoate (C) -0.0 -0.0 -0.0 -0.8 -0.1
carbon source MDC_bicarb with butyrate -0.1 -0.2 -0.3 -0.1 -0.2
sulfur source control Dimethyl sulfide sulfur source -0.0 +0.0 +0.1 -0.6 -0.1
sulfur source Thiamine HCl sulfur source -0.0 +0.1 +0.1 -0.5 -0.2
carbon source dark aerobic PM with succinate aerobic in dark +0.1 -0.1 +0.1 -0.5 -0.1
survival starvation expt 2; 14 days; outgrowth in CAAc +0.0 +0.1 -0.3 -0.2 +0.1
survival starvation expt 4; 3 days; outgrowth in CAAc -0.1 +0.1 -0.2 -0.4 +0.3
carbon source Fumarate (C); anaerobic +0.2 +0.1 -0.3 -0.2 +0.1
survival starvation expt 3; 7 days; outgrowth in CAAc -0.0 +0.1 -0.2 -0.3 +0.2
monoculture OAcsForEtOH (C); monoculture +0.0 +0.1 -0.1 -0.4 +0.2
carbon source Fumarate (C); anaerobic +0.0 +0.1 -0.3 -0.3 +0.2
sulfur source control Dimethyl sulfide sulfur source +0.0 +0.1 +0.1 -0.6 +0.2
carbon source dark aerobic PM with succinate aerobic in dark +0.0 -0.1 +0.0 -0.4 +0.3
carbon source Azelaic (C); anaerobic +0.0 +0.2 -0.2 -0.3 +0.2
monoculture OAcsForEtOH (C); monoculture +0.1 +0.1 +0.1 -0.5 +0.0
carbon source Citraconic (C); anaerobic +0.1 +0.2 -0.1 -0.3 +0.2
survival starvation expt 1; 7 days; outgrowth in CAAc +0.0 +0.1 -0.1 -0.4 +0.5
coculture dpurH coculture with Glucose and NaCl and NH4Cl +0.0 +0.0 +0.3 -0.3 +0.2
stress PM_N2O butyrate and nitrate 0.1 mM +0.1 -0.0 -0.1 +0.6 +0.2
stress PM_N2O butyrate and nitrate 0.1 mM +0.1 +0.0 +0.1 +0.6 +0.0
stress PM_N2O butyrate and nitrate 0.1 mM -0.0 -0.1 +0.0 +0.9 +0.1
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