Fitness for 5 genes in Rhodopseudomonas palustris CGA009

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 175 experiments or choose conditions or try the comparative fitness browser

500 ntTX73_022870 and TX73_022875 are separated by 17 nucleotidesTX73_022875 and TX73_022880 are separated by 17 nucleotidesTX73_022880 and TX73_022885 are separated by 21 nucleotidesTX73_022885 and TX73_022890 are separated by 111 nucleotides TX73_022870: TX73_022870 - flavin reductase family protein, at 4,969,029 to 4,969,646 _022870 TX73_022875: TX73_022875 - TetR/AcrR family transcriptional regulator, at 4,969,664 to 4,970,278 _022875 TX73_022880: TX73_022880 - efflux RND transporter permease subunit, at 4,970,296 to 4,973,433 _022880 TX73_022885: TX73_022885 - efflux RND transporter periplasmic adaptor subunit, at 4,973,455 to 4,974,558 _022885 TX73_022890: TX73_022890 - VOC family protein, at 4,974,670 to 4,975,149 _022890
Group Condition TX73_022870 TX73_022875 TX73_022880 TX73_022885 TX73_022890
stress L-Lactate (C) with 10 mM Sodium Chloride +0.0 -1.4 -0.2 -0.0 -0.3
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 -0.9 -0.2 -0.1 -0.5
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.3 -0.4 -0.5 -0.3 -0.6
stress PM_N2O butyrate and nitrate 0.1 mM +0.2 -1.5 -0.0 -0.1 +0.0
stress L-Lactate (C) with 10 mM Sodium Chloride +0.3 -0.7 -0.2 -0.3 -0.4
stress PM_N2O butyrate and nitrate 0.1 mM -0.1 -1.1 +0.0 +0.0 +0.0
stress PM_N2O butyrate and nitrate 0.1 mM +0.2 -1.5 +0.1 +0.0 +0.1
sulfur source NFM with pyruvate -0.0 -0.5 -0.1 -0.2 -0.1
stress PM_N2O butyrate and nitrate 0.1 mM +0.2 -1.2 +0.1 -0.0 -0.1
carbon source dark aerobic PM with succinate aerobic in dark -0.2 -0.7 +0.0 -0.1 +0.0
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.4 -0.4 -0.3 -0.4 -0.3
carbon source MDC_bicarb with butyrate -0.1 -0.2 -0.1 -0.2 -0.3
carbon source MDC_bicarb with butyrate -0.3 -0.5 -0.1 -0.1 -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 -0.4 -0.1 -0.1 -0.5
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.4 -0.4 -0.1 +0.0 -0.0
carbon source MDC_bicarb with butyrate and Adenine -0.4 -0.4 -0.0 +0.1 -0.1
carbon source dark aerobic PM with succinate aerobic in dark -0.3 -0.3 -0.1 -0.1 -0.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.2 -0.6 -0.1 -0.0 -0.0
carbon source dark aerobic PM with succinate aerobic in dark -0.3 -0.5 +0.1 -0.1 +0.1
stress PM_argon75_N2O25 butyrate and nitrate 0.1 mM -0.0 -0.7 +0.1 +0.1 -0.0
sulfur source NFM with pyruvate +0.3 -0.4 -0.2 -0.1 -0.1
carbon source dark aerobic PM with succinate aerobic in dark -0.3 -0.4 +0.1 +0.1 +0.0
carbon source 4-Aminobutyric (C); anaerobic +0.1 -0.4 -0.0 +0.2 -0.3
carbon source 4-Aminobutyric (C); anaerobic +0.1 -0.4 -0.0 +0.1 -0.2
carbon source 4-Aminobutyric (C); anaerobic +0.1 -0.4 +0.1 +0.1 -0.2
carbon source 4-Aminobutyric (C); anaerobic +0.2 -0.5 +0.1 +0.1 -0.1
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.2 -0.4 +0.1 +0.1 +0.1
stress PM_argon75_N2O25 butyrate and nitrate 0.1 mM +0.2 -0.4 +0.1 +0.0 +0.1
carbon source Fumarate (C); anaerobic +0.3 +0.1 +0.2 +0.1 -0.3
survival starvation expt 2; 7 days; outgrowth in CAAc +0.4 +0.3 +0.1 +0.2 -0.1
remove
TX73_022870
plot		 remove
TX73_022875
plot		 remove
TX73_022880		 remove
TX73_022885
plot		 remove
TX73_022890
plot