Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_022740 and TX73_022745 are separated by 22 nucleotidesTX73_022745 and TX73_022750 are separated by 46 nucleotidesTX73_022750 and TX73_022755 are separated by 210 nucleotidesTX73_022755 and TX73_022760 are separated by 134 nucleotides TX73_022740: TX73_022740 - TonB-dependent receptor, at 4,939,255 to 4,941,258 _022740 TX73_022745: TX73_022745 - N-acetyltransferase, at 4,941,281 to 4,941,793 _022745 TX73_022750: TX73_022750 - mechanosensitive ion channel, at 4,941,840 to 4,943,543 _022750 TX73_022755: TX73_022755 - NUDIX domain-containing protein, at 4,943,754 to 4,944,242 _022755 TX73_022760: TX73_022760 - metallophosphoesterase, at 4,944,377 to 4,945,258 _022760
Group Condition TX73_022740 TX73_022745 TX73_022750 TX73_022755 TX73_022760
carbon source MDC_bicarb with butyrate and Adenine -0.1 N.D. -0.2 -0.1 -3.5
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.1 N.D. -0.2 -0.3 -3.4
carbon source MDC_bicarb with butyrate -0.3 N.D. -0.0 -0.1 -3.2
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.0 N.D. -0.1 -0.2 -3.0
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.2 N.D. -0.1 -0.2 -2.8
carbon source PM with succinate anaerobic with light -0.0 N.D. -0.1 -0.2 -2.9
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.1 N.D. -0.1 -0.2 -2.8
carbon source PM with succinate and Sodium Formate anaerobic with light +0.0 N.D. -0.0 -0.1 -2.8
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.1 N.D. -0.0 -0.1 -2.5
stress PM_argon75_N2O25 with buyrate and 0.1 mM nitrate; in dark +0.1 N.D. +0.0 -0.1 -2.8
carbon source PM with succinate and Sodium Formate anaerobic with light -0.1 N.D. -0.1 -0.1 -2.4
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.0 N.D. -0.1 -0.1 -2.5
carbon source MDC_bicarb with butyrate and Adenine -0.1 N.D. -0.2 -0.2 -2.2
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.2 N.D. -0.1 -0.0 -2.4
carbon source Butyric Acid (C); anaerobic -0.1 N.D. -0.1 -0.1 -2.3
survival starvation expt 1; 14 days; outgrowth in CAAc -0.1 N.D. -0.1 +0.0 -2.4
carbon source MDC_bicarb with butyrate and Adenine +0.0 N.D. -0.0 -0.3 -2.3
survival starvation expt 1; 3 days; outgrowth in CAAc +0.0 N.D. -0.1 -0.1 -2.5
carbon source dark aerobic PM with succinate aerobic in dark -0.2 N.D. +0.0 -0.2 -2.2
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.1 N.D. -0.2 -0.4 -1.8
carbon source 4-Aminobutyric (C); anaerobic -0.2 N.D. -0.1 +0.0 -2.1
sulfur source Thiamine HCl sulfur source +0.0 N.D. -0.1 -0.1 -2.1
carbon source PM with succinate anaerobic with light -0.1 N.D. -0.0 -0.2 -2.0
carbon source 4-Aminobutyric (C); anaerobic -0.1 N.D. -0.1 +0.0 -2.1
carbon source MDC_bicarb with butyrate -0.1 N.D. -0.1 -0.1 -1.9
carbon source MDC_bicarb with butyrate -0.1 N.D. -0.1 -0.2 -1.7
carbon source dark aerobic PM with butyrate aerobic in dark -0.1 N.D. -0.1 -0.3 -1.6
sulfur source Thiamine HCl sulfur source +0.1 N.D. -0.2 +0.1 -1.7
sulfur source NFM with pyruvate -0.0 N.D. -0.4 +0.0 +2.5
sulfur source NFM with pyruvate +0.6 N.D. -0.4 -0.1 +2.9
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