Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 175 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
TX73_022465 and TX73_022470 are separated by 280 nucleotides
TX73_022470 and TX73_022475 are separated by 279 nucleotides
TX73_022475 and TX73_022480 overlap by 40 nucleotides
TX73_022480 and TX73_022485 overlap by 74 nucleotides
TX73_022465: TX73_022465 - DNA helicase, at 4,886,318 to 4,887,037
_022465
TX73_022470: TX73_022470 - aldo/keto reductase, at 4,887,318 to 4,888,259
_022470
TX73_022475: TX73_022475 - hypothetical protein, at 4,888,539 to 4,888,748
_022475
TX73_022480: TX73_022480 - HAD family phosphatase, at 4,888,709 to 4,889,452
_022480
TX73_022485: TX73_022485 - TetR/AcrR family transcriptional regulator, at 4,889,379 to 4,890,059
_022485
Group
Condition
TX73
_022465
TX73
_022470
TX73
_022475
TX73
_022480
TX73
_022485
carbon source
Fumarate (C); anaerobic
+0.0
-0.2
-3.1
-0.1
+0.4
carbon source dark aerobic
PM with butyrate aerobic in dark
+0.1
-0.1
-3.0
+0.1
+0.5
stress
Benzoate (C), sodium fluoride stress
+0.1
-0.9
-0.8
+0.0
-0.3
sulfur source
sodium isethionate sulfur source
-0.1
-0.5
-1.6
-0.2
+0.7
stress
Benzoate (C), sodium fluoride stress
+0.2
-0.5
-1.6
-0.2
+0.3
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.2
-1.0
-0.9
-0.1
+0.4
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.1
-0.0
-1.7
-0.1
+0.4
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
+0.1
-0.4
-0.3
-0.6
sulfur source control
sulfur source control
-0.1
+0.1
-0.4
+0.0
-0.7
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.2
-0.8
-0.4
+0.1
+0.0
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.4
-0.4
+0.7
-0.4
-0.3
carbon source
PM with succinate anaerobic with light
+0.1
+0.1
-0.7
+0.1
-0.5
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.4
-0.4
+1.0
-0.4
-0.5
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.1
-0.2
+0.4
-0.4
-0.4
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.0
-0.8
+0.4
+0.0
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
-0.3
+0.8
-0.4
-0.6
sulfur source
Taurine sulfur source
+0.1
-0.3
-0.8
-0.2
+0.8
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.0
-1.0
+1.7
-0.4
-0.5
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.2
-0.7
+0.0
-0.0
+0.5
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.5
-0.3
+1.6
-0.6
-0.2
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.1
-0.9
+1.1
-0.1
-0.2
carbon source
Citraconic (C); anaerobic
+0.1
+0.0
+0.5
+0.2
-0.7
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.2
-0.1
+0.9
-0.1
-0.0
carbon source
4-Aminobutyric (C); anaerobic
+0.1
+0.0
+1.0
+0.1
-0.4
carbon source
MDC_bicarb with butyrate and Adenine
+0.0
+0.1
+0.6
-0.3
+0.5
sulfur source control
Dimethyl sulfide sulfur source
-0.0
+0.1
+1.0
+0.1
-0.3
carbon source
Fumarate (C); anaerobic
+0.0
+0.2
+1.0
-0.1
-0.1
sulfur source
Sulfoacetic sulfur source
-0.0
-0.2
+1.1
-0.0
+0.2
sulfur source control
sulfur source control
+0.3
-0.0
+1.1
-0.0
-0.2
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.1
+0.3
+0.8
+0.1
+0.2
remove
TX73_022465
plot
remove
TX73_022470
plot
remove
TX73_022475
remove
TX73_022480
plot
remove
TX73_022485
plot