Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_022380 and TX73_022385 are separated by 164 nucleotidesTX73_022385 and TX73_022390 are separated by 191 nucleotidesTX73_022390 and TX73_022395 are separated by 148 nucleotidesTX73_022395 and TX73_022400 are separated by 136 nucleotides TX73_022380: TX73_022380 - hypothetical protein, at 4,869,981 to 4,870,142 _022380 TX73_022385: TX73_022385 - alpha-hydroxy acid oxidase, at 4,870,307 to 4,871,446 _022385 TX73_022390: TX73_022390 - enoyl-CoA hydratase/isomerase family protein, at 4,871,638 to 4,872,453 _022390 TX73_022395: TX73_022395 - response regulator, at 4,872,602 to 4,873,060 _022395 TX73_022400: TX73_022400 - hypothetical protein, at 4,873,197 to 4,874,003 _022400
Group Condition TX73_022380 TX73_022385 TX73_022390 TX73_022395 TX73_022400
sulfur source NFM_No_Mo with acetate trihydrate -0.3 -0.1 -0.2 -0.1 -0.1
carbon source dark aerobic PM with butyrate aerobic in dark +0.1 +0.1 -0.0 -0.6 -0.0
carbon source dark aerobic PM with butyrate aerobic in dark -0.5 +0.0 +0.1 -0.1 -0.1
carbon source dark aerobic PM with succinate aerobic in dark -0.3 +0.1 +0.1 -0.1 -0.2
stress L-Lactate (C) with 10 mM Sodium Chloride -0.2 +0.0 -0.1 +0.3 -0.2
carbon source Butyric Acid (C); anaerobic -0.3 +0.1 -0.2 -0.0 +0.2
carbon source Sebacic (C); anaerobic -0.3 +0.1 -0.1 +0.1 +0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.1 +0.2 -0.0 -0.2 +0.2
carbon source L-Leucine (C); anaerobic +0.2 +0.1 -0.1 -0.2 +0.3
carbon source MDC_bicarb with butyrate -0.2 +0.1 -0.1 +0.2 +0.2
stress L-Lactate (C) with 10 mM Sodium Chloride +0.2 -0.3 -0.1 +0.2 +0.1
carbon source Pimelic (C); anaerobic -0.2 +0.0 +0.0 +0.2 +0.3
carbon source dark aerobic PM with succinate aerobic in dark +0.0 +0.2 +0.2 -0.2 +0.2
stress L-Lactate (C) with 10 mM Sodium Chloride +0.7 -0.4 -0.2 +0.2 +0.1
carbon source PM with succinate anaerobic with light +0.3 -0.1 -0.1 +0.2 +0.1
sulfur source NFM_No_Mo with acetate trihydrate +0.1 +0.3 +0.3 -0.0 -0.1
stress Benzoate (C), sodium fluoride stress +0.2 -0.1 +0.2 +0.3 -0.0
sulfur source Thiamine HCl sulfur source +0.2 +0.2 +0.2 +0.1 -0.1
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.4 +0.0 -0.0 +0.3 -0.1
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.4 -0.1 -0.1 +0.1 +0.2
sulfur source NFM with pyruvate +0.5 -0.1 -0.1 -0.3 +0.5
carbon source MDC_bicarb with butyrate and Adenine -0.1 +0.2 +0.1 +0.3 +0.2
survival starvation expt 2; 7 days; outgrowth in CAAc +0.1 +0.1 +0.1 +0.2 +0.2
survival starvation expt 2; 14 days; outgrowth in CAAc +0.1 +0.2 -0.0 +0.3 +0.1
sulfur source Thiamine HCl sulfur source +0.1 +0.2 +0.2 +0.1 +0.1
stress Benzoate (C), sodium fluoride stress +0.3 +0.0 +0.1 +0.4 -0.0
sulfur source NFM with pyruvate +0.3 +0.3 -0.2 +0.0 +0.6
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.3 +9.9 -0.2 +0.3 -0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 +10.1 -0.1 +0.4 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.2 +9.9 +0.2 +0.6 +0.0
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TX73_022380
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TX73_022385
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TX73_022395
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TX73_022400
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