Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_022100 and TX73_022105 are separated by 271 nucleotidesTX73_022105 and TX73_022110 are separated by 239 nucleotidesTX73_022110 and TX73_022115 are separated by 150 nucleotidesTX73_022115 and TX73_022120 overlap by 4 nucleotides TX73_022100: TX73_022100 - D-alanyl-D-alanine carboxypeptidase, at 4,813,208 to 4,814,662 _022100 TX73_022105: TX73_022105 - long-chain fatty acid--CoA ligase, at 4,814,934 to 4,816,625 _022105 TX73_022110: TX73_022110 - peroxiredoxin, at 4,816,865 to 4,817,350 _022110 TX73_022115: TX73_022115 - ribonuclease HI, at 4,817,501 to 4,817,968 _022115 TX73_022120: TX73_022120 - homoserine kinase, at 4,817,965 to 4,818,948 _022120
Group Condition TX73_022100 TX73_022105 TX73_022110 TX73_022115 TX73_022120
carbon source 4-Hydroxybenzoate (C) +0.2 -2.0 -0.1 N.D. N.D.
carbon source 4-Hydroxybenzoate (C) -0.1 -1.7 +0.0 N.D. N.D.
carbon source 4-Hydroxybenzoate (C) +0.0 -1.6 -0.0 N.D. N.D.
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.0 -1.0 -0.1 N.D. N.D.
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.2 -0.8 +0.2 N.D. N.D.
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 -0.7 +0.1 N.D. N.D.
carbon source 4-Aminobutyric (C); anaerobic +0.0 -0.8 +0.2 N.D. N.D.
stress Benzoate (C), sodium fluoride stress +0.1 -0.6 -0.1 N.D. N.D.
carbon source 4-Aminobutyric (C); anaerobic +0.2 -0.8 -0.0 N.D. N.D.
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 -0.7 +0.2 N.D. N.D.
stress PM_N2O butyrate and nitrate 0.1 mM -0.3 -0.3 +0.2 N.D. N.D.
carbon source 4-Aminobutyric (C); anaerobic +0.3 -0.8 +0.1 N.D. N.D.
carbon source 4-Aminobutyric (C); anaerobic +0.1 -0.8 +0.3 N.D. N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride +0.4 -0.2 -0.2 N.D. N.D.
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.1 -0.4 +0.3 N.D. N.D.
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.3 -0.4 +0.1 N.D. N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride +0.3 -0.3 +0.2 N.D. N.D.
sulfur source Dimethylsulfoniopropionate sulfur source +0.4 +0.4 -0.3 N.D. N.D.
survival starvation expt 1; 14 days; outgrowth in CAAc -0.3 +0.8 -0.1 N.D. N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.5 +0.3 -0.1 N.D. N.D.
sulfur source NFM with pyruvate +0.6 -0.0 +0.2 N.D. N.D.
survival starvation expt 3; 14 days; outgrowth in CAAc -0.2 +0.9 +0.0 N.D. N.D.
sulfur source Sulfoacetic sulfur source +0.1 +0.8 -0.0 N.D. N.D.
sulfur source Sulfoacetic sulfur source +0.2 +0.7 -0.0 N.D. N.D.
survival starvation expt 4; 14 days; outgrowth in CAAc -0.2 +0.9 +0.2 N.D. N.D.
sulfur source Dimethylsulfoniopropionate sulfur source +0.2 +0.6 +0.1 N.D. N.D.
survival starvation expt 2; 14 days; outgrowth in CAAc -0.3 +1.0 +0.2 N.D. N.D.
sulfur source NFM with succinate +0.7 +0.2 +0.3 N.D. N.D.
sulfur source NFM_No_Mo_Plus_VCl3 with acetate trihydrate +0.3 +1.1 -0.1 N.D. N.D.
sulfur source NFM with pyruvate +0.7 +0.1 +0.6 N.D. N.D.
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