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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_021745 and TX73_021750 are separated by 70 nucleotides
TX73_021750 and TX73_021755 are separated by 97 nucleotides
TX73_021755 and TX73_021760 are separated by 311 nucleotides
TX73_021760 and TX73_021765 are separated by 139 nucleotides
TX73_021745: TX73_021745 - alpha/beta hydrolase, at 4,740,001 to 4,741,005
_021745
TX73_021750: TX73_021750 - tetratricopeptide repeat protein, at 4,741,076 to 4,741,738
_021750
TX73_021755: TX73_021755 - type B 50S ribosomal protein L36, at 4,741,836 to 4,741,961
_021755
TX73_021760: TX73_021760 - 4-hydroxyphenyl-beta-ketoacyl-CoA hydrolase, at 4,742,273 to 4,743,142
_021760
TX73_021765: TX73_021765 - haloacid dehalogenase type II, at 4,743,282 to 4,744,028
_021765
Group
Condition
TX73
_021745
TX73
_021750
TX73
_021755
TX73
_021760
TX73
_021765
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.0
-0.2
N.D.
-0.5
-0.2
sulfur source
NFM with pyruvate
-0.0
-0.3
N.D.
-0.0
-0.2
carbon source
MDC_bicarb with butyrate and Adenine
-0.2
-0.2
N.D.
-0.2
+0.0
carbon source
4-Hydroxybenzoate (C)
-0.4
+0.1
N.D.
-0.2
-0.1
sulfur source
NFM with pyruvate
+0.1
-0.2
N.D.
+0.2
-0.5
carbon source
MDC_bicarb with butyrate and Adenine
-0.3
-0.1
N.D.
+0.0
-0.0
carbon source
MDC_bicarb with butyrate and Adenine
-0.3
-0.1
N.D.
+0.1
-0.1
carbon source
Butyric Acid (C); anaerobic
-0.1
+0.1
N.D.
-0.1
-0.1
survival outgrowth control
starvation outgrowth control in CAAc
-0.2
+0.1
N.D.
-0.2
-0.0
carbon source
PM with succinate anaerobic with light
-0.1
-0.2
N.D.
+0.1
-0.1
carbon source
aspen wood chips that have been decomposed by a fungus (C)
+0.1
-0.2
N.D.
-0.1
-0.2
carbon source
Azelaic (C); anaerobic
-0.3
+0.1
N.D.
-0.1
+0.0
survival
starvation expt 4; 3 days; outgrowth in CAAc
-0.2
+0.2
N.D.
-0.2
+0.0
sulfur source
NFM_No_Mo with acetate trihydrate
-0.1
+0.2
N.D.
-0.1
+0.0
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.1
-0.2
N.D.
+0.0
-0.1
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.0
-0.1
N.D.
-0.1
+0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.3
-0.4
N.D.
+0.1
-0.1
survival
starvation expt 2; 7 days; outgrowth in CAAc
-0.2
+0.1
N.D.
-0.1
+0.1
carbon source
Azelaic (C); anaerobic
-0.1
+0.3
N.D.
-0.1
+0.0
carbon source
Fumarate (C); anaerobic
+0.1
-0.2
N.D.
+0.1
+0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.3
+0.6
N.D.
-0.2
+0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.0
+0.5
N.D.
+0.0
-0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.2
+0.5
N.D.
+0.1
-0.1
sulfur source
sodium isethionate sulfur source
+0.3
-0.2
N.D.
+0.1
+0.2
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
-0.0
N.D.
+0.2
+0.3
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.1
+0.8
N.D.
-0.1
-0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.1
+0.8
N.D.
-0.0
+0.0
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.0
+0.6
N.D.
+0.0
+0.1
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.1
+0.7
N.D.
+0.1
-0.0
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.0
+0.9
N.D.
+0.1
+0.0
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