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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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500 nt
TX73_021720 and TX73_021725 are separated by 187 nucleotides
TX73_021725 and TX73_021730 are separated by 191 nucleotides
TX73_021730 and TX73_021735 overlap by 4 nucleotides
TX73_021735 and TX73_021740 are separated by 226 nucleotides
TX73_021720: TX73_021720 - DUF2312 domain-containing protein, at 4,736,384 to 4,736,656
_021720
TX73_021725: TX73_021725 - DUF1244 domain-containing protein, at 4,736,844 to 4,737,143
_021725
TX73_021730: TX73_021730 - DUF1036 domain-containing protein, at 4,737,335 to 4,737,919
_021730
TX73_021735: TX73_021735 - pyruvate kinase, at 4,737,916 to 4,739,349
_021735
TX73_021740: TX73_021740 - OsmC family protein, at 4,739,576 to 4,740,004
_021740
Group
Condition
TX73
_021720
TX73
_021725
TX73
_021730
TX73
_021735
TX73
_021740
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
N.D.
-0.5
N.D.
N.D.
-0.3
carbon source
4-Hydroxybenzoate (C)
N.D.
-1.0
N.D.
N.D.
+0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
N.D.
+0.5
N.D.
N.D.
-0.4
carbon source
PM with succinate and Sodium Formate anaerobic with light
N.D.
+0.6
N.D.
N.D.
-0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
N.D.
+0.7
N.D.
N.D.
-0.3
carbon source
PM with succinate anaerobic with light
N.D.
+0.8
N.D.
N.D.
-0.2
carbon source dark aerobic
PM with succinate aerobic in dark
N.D.
+0.7
N.D.
N.D.
+0.0
carbon source
aspen wood chips that have been decomposed by a fungus (C)
N.D.
+0.3
N.D.
N.D.
+0.4
carbon source
4-Aminobutyric (C); anaerobic
N.D.
+0.3
N.D.
N.D.
+0.4
sulfur source
NFM with succinate
N.D.
+0.6
N.D.
N.D.
+0.1
carbon source
4-Aminobutyric (C); anaerobic
N.D.
+0.5
N.D.
N.D.
+0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
N.D.
+0.3
N.D.
N.D.
+0.4
carbon source
L-Malic (C); anaerobic
N.D.
+0.7
N.D.
N.D.
+0.0
carbon source dark aerobic
PM with succinate aerobic in dark
N.D.
+0.8
N.D.
N.D.
+0.0
carbon source
Fumarate (C); anaerobic
N.D.
+0.6
N.D.
N.D.
+0.2
sulfur source
NFM with succinate
N.D.
+0.7
N.D.
N.D.
+0.1
carbon source dark aerobic
PM with succinate aerobic in dark
N.D.
+1.1
N.D.
N.D.
-0.2
carbon source
Fumarate (C); anaerobic
N.D.
+0.6
N.D.
N.D.
+0.2
sulfur source
NFM with pyruvate
N.D.
+0.7
N.D.
N.D.
+0.2
carbon source dark aerobic
PM with succinate aerobic in dark
N.D.
+0.5
N.D.
N.D.
+0.4
carbon source
L-Malic (C); anaerobic
N.D.
+0.8
N.D.
N.D.
+0.2
carbon source
PM with succinate anaerobic with light
N.D.
+0.7
N.D.
N.D.
+0.3
carbon source dark aerobic
PM with succinate aerobic in dark
N.D.
+0.7
N.D.
N.D.
+0.3
carbon source
Fumarate (C); anaerobic
N.D.
+0.9
N.D.
N.D.
+0.3
carbon source
L-Malic (C); anaerobic
N.D.
+0.9
N.D.
N.D.
+0.3
carbon source
Citraconic (C); anaerobic
N.D.
+1.3
N.D.
N.D.
-0.0
carbon source
Citraconic (C); anaerobic
N.D.
+1.4
N.D.
N.D.
-0.1
sulfur source
NFM with pyruvate
N.D.
+0.6
N.D.
N.D.
+0.8
carbon source
Citraconic (C); anaerobic
N.D.
+1.5
N.D.
N.D.
+0.1
carbon source
Citraconic (C); anaerobic
N.D.
+1.5
N.D.
N.D.
+0.3
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