Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_021690 and TX73_021695 are separated by 33 nucleotidesTX73_021695 and TX73_021700 are separated by 365 nucleotidesTX73_021700 and TX73_021705 are separated by 95 nucleotidesTX73_021705 and TX73_021710 are separated by 349 nucleotides TX73_021690: TX73_021690 - type II toxin-antitoxin system death-on-curing family toxin, at 4,727,088 to 4,727,252 _021690 TX73_021695: TX73_021695 - M3 family oligoendopeptidase, at 4,727,286 to 4,729,202 _021695 TX73_021700: TX73_021700 - TerC family protein, at 4,729,568 to 4,730,203 _021700 TX73_021705: TX73_021705 - sigma-54 dependent transcriptional regulator, at 4,730,299 to 4,731,786 _021705 TX73_021710: TX73_021710 - L,D-transpeptidase family protein, at 4,732,136 to 4,734,310 _021710
Group Condition TX73_021690 TX73_021695 TX73_021700 TX73_021705 TX73_021710
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.2 -0.0 -0.2 -1.2 +0.2
survival starvation expt 2; 3 days; outgrowth in CAAc +0.1 -0.2 -0.1 -0.7 -0.0
survival outgrowth control starvation outgrowth control in CAAc +0.2 -0.2 -0.0 -0.9 -0.0
survival outgrowth control starvation outgrowth control in CAAc +0.1 -0.2 -0.1 -0.6 +0.1
survival outgrowth control starvation outgrowth control in CAAc +0.2 -0.2 +0.0 -0.8 +0.0
stress L-Lactate (C) with 10 mM Sodium Chloride +0.1 +0.5 -0.1 -1.1 +0.1
carbon source 4-Hydroxybenzoate (C) -0.1 -0.2 -0.5 +0.3 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 +0.2 -0.0 -0.7 +0.1
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.1 +0.1 -0.0 -0.6 +0.2
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.1 +0.1 -0.0 -0.7 +0.2
carbon source Sebacic (C); anaerobic +0.2 +0.2 -0.1 -0.6 +0.0
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 +0.7 -0.1 -0.6 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.4 +0.1 +0.1 -0.8 +0.2
carbon source 4-Hydroxybenzoate (C) +0.1 -0.2 -0.3 +0.6 +0.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.2 -0.3 -0.0 +0.5 -0.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.0 -0.3 -0.1 +0.7 -0.1
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.3 +0.1 +0.2 -0.5 +0.2
carbon source MDC_bicarb with butyrate and Adenine -0.4 +0.1 -0.1 +0.8 -0.1
carbon source MDC_bicarb with butyrate -0.3 +0.3 -0.2 +0.5 +0.0
carbon source MDC_bicarb with butyrate and Adenine -0.2 +0.1 -0.1 +0.7 +0.0
carbon source PM with succinate and Sodium Formate anaerobic with light -0.1 +0.2 -0.1 +0.7 -0.0
stress L-Lactate (C) with 10 mM Sodium Chloride +0.1 +0.6 -0.0 -0.2 +0.2
carbon source L-Malic (C); anaerobic +0.1 +0.4 -0.1 +0.4 +0.0
carbon source PM with succinate and Sodium Formate anaerobic with light +0.2 +0.3 -0.1 +0.4 +0.1
carbon source Citraconic (C); anaerobic +0.3 +0.0 -0.1 +0.5 +0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 +0.4 +0.0 +0.4 +0.2
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 +0.4 +0.1 +0.5 +0.2
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.0 +0.4 +0.1 +0.8 +0.2
sulfur source NFM with pyruvate -0.1 +0.3 -0.1 +1.8 -0.0
sulfur source NFM with pyruvate -0.2 +0.3 +0.2 +1.8 +0.2
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