Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_020835 and TX73_020840 overlap by 4 nucleotidesTX73_020840 and TX73_020845 overlap by 8 nucleotidesTX73_020845 and TX73_020850 are separated by 235 nucleotidesTX73_020850 and TX73_020855 are separated by 15 nucleotides TX73_020835: TX73_020835 - branched-chain amino acid ABC transporter permease, at 4,551,368 to 4,552,312 _020835 TX73_020840: TX73_020840 - ABC transporter ATP-binding protein, at 4,552,309 to 4,553,091 _020840 TX73_020845: TX73_020845 - ABC transporter ATP-binding protein, at 4,553,084 to 4,553,788 _020845 TX73_020850: TX73_020850 - cobalamin-independent methionine synthase II family protein, at 4,554,024 to 4,555,145 _020850 TX73_020855: TX73_020855 - ABC transporter ATP-binding protein, at 4,555,161 to 4,555,877 _020855
Group Condition TX73_020835 TX73_020840 TX73_020845 TX73_020850 TX73_020855
carbon source Citraconic (C); anaerobic -0.2 -0.3 +0.0 +0.0 -0.3
carbon source Pimelic (C); anaerobic -0.3 +0.2 -0.0 +0.0 -0.4
carbon source Pimelic (C); anaerobic -0.3 +0.2 -0.1 -0.0 -0.4
carbon source Citraconic (C); anaerobic +0.1 +0.1 -0.1 -0.1 -0.5
survival starvation expt 4; 14 days; outgrowth in CAAc -0.2 +0.2 -0.3 -0.1 -0.1
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 +0.4 -0.5 +0.0 -0.3
survival starvation expt 2; 14 days; outgrowth in CAAc -0.2 +0.2 -0.1 -0.2 -0.0
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 +0.1 -0.3 +0.1 -0.3
carbon source Butyric Acid (C); anaerobic -0.3 +0.2 -0.2 +0.1 -0.0
carbon source Pimelic (C); anaerobic +0.1 +0.2 +0.0 -0.3 -0.2
stress Benzoate (C), sodium fluoride stress -0.4 -0.0 +0.2 -0.1 +0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.3 +0.1 +0.1 -0.4 -0.2
carbon source L-Malic (C); anaerobic -0.2 +0.2 -0.1 +0.2 -0.0
carbon source PM with succinate and Sodium Formate anaerobic with light +0.3 -0.1 -0.2 -0.0 +0.0
carbon source aspen wood chips that have been decomposed by a fungus (C) -0.2 +0.2 +0.2 -0.2 -0.0
stress L-Lactate (C) with 10 mM Sodium Chloride -0.0 +0.3 -0.2 +0.2 -0.2
carbon source 4-Hydroxybenzoate (C) +0.2 -0.0 +0.5 -0.3 -0.2
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.2 +0.0 +0.2 +0.1 -0.3
stress Benzoate (C), sodium fluoride stress -0.2 +0.2 +0.3 -0.1 +0.1
carbon source dark aerobic PM with succinate aerobic in dark +0.1 -0.2 +0.1 +0.3 +0.0
sulfur source 2-(Methylthio)ethanol sulfur source -0.2 +0.1 +0.3 +0.1 -0.0
stress PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark +0.2 -0.1 +0.1 -0.1 +0.2
carbon source dark aerobic PM with succinate aerobic in dark -0.0 -0.0 +0.3 -0.1 +0.3
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.1 +0.3 +0.2 -0.1 +0.1
carbon source MDC_bicarb with butyrate +0.2 -0.0 +0.4 +0.1 +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.3 +0.1 +0.3 +0.0 -0.0
sulfur source NFM with pyruvate +0.1 +0.2 +0.4 -0.2 +0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.6 +0.2 +0.2 -0.0 -0.2
sulfur source NFM with pyruvate +0.1 +0.3 +0.3 +0.0 +0.1
sulfur source 2-(Methylthio)ethanol sulfur source +0.3 +0.1 +0.3 +0.0 +0.2
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