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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_020450 and TX73_020455 are separated by 89 nucleotides
TX73_020455 and TX73_020460 are separated by 7 nucleotides
TX73_020460 and TX73_020465 are separated by 164 nucleotides
TX73_020465 and TX73_020470 are separated by 68 nucleotides
TX73_020450: TX73_020450 - DUF2147 domain-containing protein, at 4,458,272 to 4,458,934
_020450
TX73_020455: TX73_020455 - O-antigen ligase family protein, at 4,459,024 to 4,460,292
_020455
TX73_020460: TX73_020460 - glycosyltransferase family 1 protein, at 4,460,300 to 4,461,625
_020460
TX73_020465: TX73_020465 - glycosyltransferase, at 4,461,790 to 4,462,839
_020465
TX73_020470: TX73_020470 - GDP-mannose 4,6-dehydratase, at 4,462,908 to 4,463,894
_020470
Group
Condition
TX73
_020450
TX73
_020455
TX73
_020460
TX73
_020465
TX73
_020470
monoculture
OAcsForEtOH (C); monoculture
-0.8
-2.1
-2.2
-2.5
+0.1
monoculture
OAcsForEtOH (C); monoculture
-0.9
-2.0
-2.2
-2.1
-0.1
monoculture
OAcsForEtOH (C); monoculture
-0.6
-2.0
-1.9
-2.4
+0.2
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
-0.0
-2.0
-1.8
-2.3
+0.1
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
+0.2
-1.8
-1.9
-2.1
+0.1
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.1
-1.6
-0.9
-2.0
-0.3
carbon source dark aerobic
PM with succinate aerobic in dark
-0.0
-1.4
-1.4
-1.7
-0.3
sulfur source
Thiamine HCl sulfur source
-0.5
-1.3
-1.2
-1.1
-0.2
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
-0.1
-1.4
-1.5
-1.3
+0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.3
-1.1
-1.4
-1.4
-0.3
carbon source dark aerobic
PM with succinate aerobic in dark
-0.0
-1.1
-1.1
-1.7
+0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
-0.9
-1.2
-1.9
+0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.3
-1.3
-1.4
-1.5
+0.0
sulfur source
Thiamine HCl sulfur source
-0.6
-1.2
-0.8
-0.9
-0.0
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.5
-1.7
-0.9
-1.3
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.4
-1.1
-1.0
-1.6
+0.0
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-1.6
-0.5
-0.4
-1.0
+0.3
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.8
-0.8
-0.6
-1.0
+0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
+0.3
-1.0
-1.0
-1.1
-0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.4
-0.9
-0.8
-1.1
+0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
-1.4
-0.7
-0.3
-0.5
+0.0
carbon source
MDC_bicarb with butyrate
+0.3
-1.0
-1.0
-1.0
-0.0
carbon source dark aerobic
PM with butyrate aerobic in dark
+0.1
-0.7
-0.6
-1.2
-0.4
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-1.2
-0.8
-0.5
-0.6
+0.3
carbon source
MDC_bicarb with butyrate
+0.1
-0.8
-0.8
-1.2
+0.0
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.7
-0.7
-0.7
-0.7
+0.2
sulfur source
Thiamine HCl sulfur source
+0.3
-1.1
-1.0
-1.0
+0.2
carbon source
4-Hydroxybenzoate (C)
+0.3
-0.6
-0.7
-1.0
-0.3
carbon source
MDC_bicarb with butyrate
+0.8
-1.0
-0.8
-1.5
+0.3
carbon source
MDC_bicarb with butyrate
+0.9
-1.0
-0.8
-1.1
+0.3
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