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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_020175 and TX73_020180 are separated by 476 nucleotides
TX73_020180 and TX73_020185 are separated by 29 nucleotides
TX73_020185 and TX73_020190 are separated by 25 nucleotides
TX73_020190 and TX73_020195 are separated by 177 nucleotides
TX73_020175: TX73_020175 - tetratricopeptide repeat protein, at 4,390,619 to 4,394,347
_020175
TX73_020180: TX73_020180 - hypothetical protein, at 4,394,824 to 4,395,153
_020180
TX73_020185: TX73_020185 - carboxylesterase/lipase family protein, at 4,395,183 to 4,396,706
_020185
TX73_020190: TX73_020190 - helix-turn-helix domain containing protein, at 4,396,732 to 4,397,355
_020190
TX73_020195: TX73_020195 - flagellar protein FlbB, at 4,397,533 to 4,398,297
_020195
Group
Condition
TX73
_020175
TX73
_020180
TX73
_020185
TX73
_020190
TX73
_020195
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.2
-0.7
-0.1
-0.3
+0.1
stress
PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark
-0.2
-0.4
-0.2
+0.4
-0.2
sulfur source
Thiamine HCl sulfur source
+0.5
-0.8
-0.0
+0.1
+0.4
carbon source
PM with succinate anaerobic with light
+0.5
-0.5
-0.2
-0.1
+0.4
carbon source dark aerobic
PM with succinate aerobic in dark
+0.8
-0.3
-0.1
-0.0
+0.8
carbon source
MDC_bicarb with butyrate
+0.6
+0.2
-0.1
-0.1
+0.6
carbon source
4-Hydroxybenzoate (C)
+0.6
-0.3
-0.0
+0.1
+0.9
carbon source dark aerobic
PM with succinate aerobic in dark
+0.7
-0.1
-0.1
+0.0
+0.6
carbon source dark aerobic
PM with succinate aerobic in dark
+0.7
+0.1
-0.2
-0.1
+0.8
carbon source dark aerobic
PM with succinate aerobic in dark
+0.7
+0.3
-0.1
-0.3
+0.8
carbon source dark aerobic
PM with succinate aerobic in dark
+0.7
+0.0
-0.1
+0.0
+0.8
carbon source
MDC_bicarb with butyrate
+0.6
+0.2
+0.0
+0.1
+0.5
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.7
-0.1
+0.0
+0.0
+0.8
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.8
-0.2
+0.1
-0.1
+0.9
carbon source dark aerobic
PM with succinate aerobic in dark
+0.7
+0.1
-0.0
+0.0
+0.8
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.9
-0.3
+0.1
-0.1
+1.0
carbon source
MDC_bicarb with butyrate
+0.8
-0.1
+0.1
-0.1
+0.8
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
+0.7
+0.2
+0.1
+0.0
+0.7
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
+0.8
+0.3
-0.0
+0.1
+0.6
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
+1.1
-0.5
+0.1
-0.0
+1.0
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
+1.0
+0.1
+0.1
-0.1
+0.8
monoculture
OAcsForEtOH (C); monoculture
+1.0
-0.0
+0.1
-0.0
+0.9
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
+1.1
-0.2
-0.0
+0.0
+1.1
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
+1.1
-0.0
-0.0
+0.0
+1.0
monoculture
OAcsForEtOH (C); monoculture
+1.1
+0.2
-0.0
+0.0
+1.0
stress
PM_N2O butyrate and nitrate 0.1 mM
+1.0
+0.1
+0.0
-0.0
+1.2
monoculture
OAcsForEtOH (C); monoculture
+1.2
+0.2
+0.1
-0.1
+1.1
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
+1.0
+0.5
-0.0
+0.0
+0.9
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+3.1
-0.3
+0.0
-0.1
+3.1
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+3.2
-0.3
+0.0
-0.3
+3.2
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