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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_020000 and TX73_020005 are separated by 384 nucleotides
TX73_020005 and TX73_020010 are separated by 293 nucleotides
TX73_020010 and TX73_020015 are separated by 75 nucleotides
TX73_020015 and TX73_020020 are separated by 160 nucleotides
TX73_020000: TX73_020000 - hypothetical protein, at 4,362,436 to 4,362,582
_020000
TX73_020005: TX73_020005 - hypothetical protein, at 4,362,967 to 4,363,353
_020005
TX73_020010: TX73_020010 - hypothetical protein, at 4,363,647 to 4,363,787
_020010
TX73_020015: TX73_020015 - Crp/Fnr family transcriptional regulator, at 4,363,863 to 4,364,528
_020015
TX73_020020: TX73_020020 - hypothetical protein, at 4,364,689 to 4,364,955
_020020
Group
Condition
TX73
_020000
TX73
_020005
TX73
_020010
TX73
_020015
TX73
_020020
carbon source dark aerobic
PM with succinate aerobic in dark
+0.0
-0.3
-0.8
-0.3
+0.3
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.4
-0.2
-1.2
-0.2
+0.4
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
-0.3
-0.6
-0.2
+0.5
carbon source dark aerobic
PM with succinate aerobic in dark
+0.2
-0.3
-0.7
-0.1
+0.4
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+1.0
-0.1
-1.0
-0.2
+0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.3
-0.2
-0.6
-0.3
+0.6
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.7
-0.3
-0.4
-0.2
+0.1
carbon source
PM with succinate anaerobic with light
-0.2
-0.2
-0.4
-0.2
+1.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.8
-0.3
-0.6
-0.1
+0.3
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+1.2
-0.5
-0.5
-0.2
+0.2
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.9
-0.1
-0.4
-0.3
+0.2
carbon source
MDC_bicarb with butyrate
+0.7
-0.2
-0.6
-0.3
+0.7
carbon source
MDC_bicarb with butyrate and Adenine
+0.5
+0.1
-0.5
-0.3
+0.6
carbon source
Butyric Acid (C); anaerobic
+0.2
-0.1
-0.6
+0.0
+0.9
sulfur source
NFM with succinate
+0.1
-0.2
-0.4
-0.1
+1.0
sulfur source
NFM with succinate
+0.2
-0.1
-0.4
-0.2
+0.9
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+1.1
-0.1
-0.5
-0.1
+0.1
carbon source
PM with succinate anaerobic with light
+0.2
-0.1
-0.4
-0.2
+1.1
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.1
-0.1
-0.2
-0.1
+1.0
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.1
-0.2
-0.1
-0.2
+1.3
carbon source
Butyric Acid (C); anaerobic
+0.3
-0.0
-0.6
+0.1
+1.0
sulfur source
NFM with pyruvate
-0.4
+0.0
+0.4
+0.1
+1.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.9
+0.1
-0.7
+0.0
+1.1
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.6
+0.0
-0.4
-0.1
+1.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.2
+0.2
-0.6
+0.1
+1.8
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.7
+0.1
-0.3
-0.0
+1.3
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.6
+0.1
-0.4
+0.1
+1.4
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.8
-0.0
-0.5
-0.0
+1.4
sulfur source
NFM with pyruvate
+0.5
+0.1
+0.2
-0.0
+1.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.8
+0.1
-0.3
-0.0
+1.5
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