Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_019945 and TX73_019950 are separated by 24 nucleotidesTX73_019950 and TX73_019955 are separated by 158 nucleotidesTX73_019955 and TX73_019960 overlap by 70 nucleotidesTX73_019960 and TX73_019965 are separated by 43 nucleotides TX73_019945: TX73_019945 - helix-turn-helix domain-containing protein, at 4,354,999 to 4,355,565 _019945 TX73_019950: TX73_019950 - DNA-binding protein, at 4,355,590 to 4,355,838 _019950 TX73_019955: TX73_019955 - helix-turn-helix domain-containing protein, at 4,355,997 to 4,356,953 _019955 TX73_019960: TX73_019960 - hypothetical protein, at 4,356,884 to 4,357,117 _019960 TX73_019965: TX73_019965 - hypothetical protein, at 4,357,161 to 4,357,481 _019965
Group Condition TX73_019945 TX73_019950 TX73_019955 TX73_019960 TX73_019965
carbon source dark aerobic PM with succinate aerobic in dark -0.1 -0.3 -0.1 -0.7 +0.0
carbon source Azelaic (C); anaerobic -0.2 +0.0 -0.0 -0.8 -0.3
carbon source Citraconic (C); anaerobic +0.1 -0.2 +0.0 -1.1 -0.1
carbon source dark aerobic PM with succinate aerobic in dark -0.3 +0.1 -0.1 -0.5 -0.3
carbon source 4-Aminobutyric (C); anaerobic +0.1 -0.2 +0.0 -1.0 -0.1
carbon source PM with succinate anaerobic with light +0.1 -0.3 -0.0 -0.7 -0.2
sulfur source NFM with pyruvate -0.0 -0.5 -0.3 +0.3 -0.4
survival starvation expt 3; 7 days; outgrowth in CAAc +0.1 -0.2 +0.0 -0.6 -0.3
sulfur source sodium isethionate sulfur source +0.1 -0.0 -0.1 -0.6 -0.3
carbon source L-Malic (C); anaerobic +0.1 -0.2 +0.1 -0.8 -0.2
carbon source dark aerobic PM with succinate aerobic in dark -0.5 +0.1 -0.1 -0.3 -0.2
carbon source Citraconic (C); anaerobic +0.2 -0.1 +0.1 -0.9 +0.0
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.2 -0.2 -0.3 +0.1 -0.3
carbon source Butyric Acid (C); anaerobic +0.3 -0.1 -0.0 -0.7 -0.0
stress L-Lactate (C) with 10 mM Sodium Chloride -0.0 -0.6 +0.2 +0.8 -0.8
survival starvation expt 2; 14 days; outgrowth in CAAc +0.1 +0.2 +0.1 -0.8 -0.1
carbon source Butyric Acid (C); anaerobic +0.3 +0.1 +0.1 -0.6 -0.1
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.3 -0.3 +0.0 +0.5 -0.0
carbon source MDC_bicarb with butyrate and Adenine +0.3 +0.1 -0.2 +0.2 -0.4
sulfur source NFM with pyruvate -0.3 +0.0 -0.4 +0.9 -0.2
stress Benzoate (C), sodium fluoride stress -0.2 -0.1 +0.1 +0.5 -0.2
stress L-Lactate (C) with 10 mM Sodium Chloride +0.2 +0.2 +0.0 +0.4 -0.7
stress L-Lactate (C) with 10 mM Sodium Chloride +0.0 -0.6 +0.0 +1.0 -0.2
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.0 -0.1 -0.1 +0.8 -0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 -0.4 +0.3 +0.8 -0.2
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.2 -0.1 -0.1 +0.7 -0.2
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.1 -0.1 -0.0 +1.0 -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.2 -0.4 +0.1 +0.9 +0.1
carbon source 4-Hydroxybenzoate (C) +0.2 -0.1 -0.1 +1.2 -0.0
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.4 +0.1 -0.1 +0.3 +0.4
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