Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_019840 and TX73_019845 are separated by 94 nucleotidesTX73_019845 and TX73_019850 are separated by 180 nucleotidesTX73_019850 and TX73_019855 are separated by 389 nucleotidesTX73_019855 and TX73_019860 are separated by 79 nucleotides TX73_019840: TX73_019840 - DUF2147 domain-containing protein, at 4,324,786 to 4,325,187 _019840 TX73_019845: TX73_019845 - diguanylate cyclase, at 4,325,282 to 4,326,274 _019845 TX73_019850: TX73_019850 - TrmJ/YjtD family RNA methyltransferase, at 4,326,455 to 4,327,654 _019850 TX73_019855: TX73_019855 - NADP-dependent isocitrate dehydrogenase, at 4,328,044 to 4,329,270 _019855 TX73_019860: TX73_019860 - caspase family protein, at 4,329,350 to 4,331,251 _019860
Group Condition TX73_019840 TX73_019845 TX73_019850 TX73_019855 TX73_019860
stress L-Lactate (C) with 10 mM Sodium Chloride -0.3 -0.4 -1.0 N.D. +0.0
stress L-Lactate (C) with 10 mM Sodium Chloride -0.3 -0.1 -0.8 N.D. +0.1
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark -0.2 -0.1 -0.3 N.D. -0.0
stress L-Lactate (C) with 10 mM Sodium Chloride +0.0 -0.2 -0.6 N.D. +0.0
carbon source Pimelic (C); anaerobic -0.2 -0.1 -0.2 N.D. -0.1
carbon source MDC_bicarb with butyrate -0.1 -0.1 -0.3 N.D. -0.1
carbon source Butyric Acid (C); anaerobic -0.1 -0.1 -0.3 N.D. +0.0
stress PM_N2O butyrate and nitrate 0.1 mM -0.0 -0.1 -0.3 N.D. -0.1
survival starvation expt 3; 7 days; outgrowth in CAAc -0.0 -0.2 -0.4 N.D. +0.0
carbon source 4-Hydroxybenzoate (C) -0.1 +0.0 -0.5 N.D. +0.0
stress PM_N2O butyrate and nitrate 0.1 mM -0.1 +0.0 -0.4 N.D. -0.0
carbon source MDC_bicarb with butyrate -0.1 -0.0 -0.3 N.D. -0.0
carbon source MDC_bicarb with butyrate -0.2 -0.0 -0.3 N.D. +0.0
sulfur source Dimethylsulfoniopropionate sulfur source -0.0 +0.0 -0.3 N.D. -0.1
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM -0.2 +0.1 -0.3 N.D. -0.0
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.0 -0.0 -0.5 N.D. +0.1
carbon source 4-Hydroxybenzoate (C) -0.1 +0.1 -0.4 N.D. +0.0
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.1 +0.1 -0.4 N.D. +0.0
survival starvation expt 1; 14 days; outgrowth in CAAc -0.2 -0.0 -0.3 N.D. +0.1
carbon source 4-Hydroxybenzoate (C) -0.1 +0.0 -0.4 N.D. +0.1
sulfur source control sulfur source control -0.2 -0.2 +0.0 N.D. +0.1
carbon source Butyric Acid (C); anaerobic +0.1 -0.1 -0.3 N.D. +0.0
survival starvation expt 2; 7 days; outgrowth in CAAc -0.1 -0.0 -0.3 N.D. +0.1
stress PM_argon75_N2O25 with buyrate and 0.1 mM nitrate; in dark +0.1 -0.0 -0.3 N.D. -0.0
stress PM_argon75_N2O25 with buyrate and 0.1 mM nitrate; in dark -0.1 +0.1 -0.2 N.D. +0.0
survival starvation expt 4; 7 days; outgrowth in CAAc +0.1 +0.1 -0.4 N.D. +0.0
sulfur source NFM with pyruvate +0.3 +0.1 -0.2 N.D. -0.0
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.2 +0.1 +0.3 N.D. -0.0
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.0 -0.1 +0.2 N.D. +0.1
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.3 +0.1 -0.1 N.D. +0.1
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TX73_019845
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