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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_019650 and TX73_019655 are separated by 99 nucleotides
TX73_019655 and TX73_019660 are separated by 11 nucleotides
TX73_019660 and TX73_019665 overlap by 4 nucleotides
TX73_019665 and TX73_019670 are separated by 30 nucleotides
TX73_019650: TX73_019650 - enoyl-CoA hydratase-related protein, at 4,292,610 to 4,293,362
_019650
TX73_019655: TX73_019655 - LysR family transcriptional regulator, at 4,293,462 to 4,294,292
_019655
TX73_019660: TX73_019660 - molybdopterin-binding/glycosyltransferase family 2 protein, at 4,294,304 to 4,295,905
_019660
TX73_019665: TX73_019665 - XdhC family protein, at 4,295,902 to 4,296,603
_019665
TX73_019670: TX73_019670 - XdhC family protein, at 4,296,634 to 4,296,960
_019670
Group
Condition
TX73
_019650
TX73
_019655
TX73
_019660
TX73
_019665
TX73
_019670
carbon source
4-Hydroxybenzoate (C)
-0.0
-0.1
-4.6
-7.4
-7.7
carbon source
4-Hydroxybenzoate (C)
+0.0
-0.1
-3.7
-5.1
-5.0
carbon source
4-Hydroxybenzoate (C)
-0.0
-0.0
-3.3
-4.2
-4.9
carbon source
4-Aminobutyric (C); anaerobic
-0.1
+0.1
-1.2
-2.0
-1.6
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.0
-0.2
-1.1
-1.6
-1.3
carbon source
4-Aminobutyric (C); anaerobic
+0.1
-0.0
-1.2
-1.8
-1.1
carbon source
4-Aminobutyric (C); anaerobic
-0.1
-0.1
-1.2
-1.5
-1.0
carbon source
4-Aminobutyric (C); anaerobic
+0.1
-0.0
-1.1
-1.4
-1.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.0
-0.1
-1.0
-1.3
-1.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.1
+0.0
-0.7
-0.8
-1.3
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.0
-0.0
-1.0
-0.6
-1.0
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.1
+0.1
-0.5
-1.1
-0.3
stress
Benzoate (C), sodium fluoride stress
-0.1
-0.0
-0.3
-0.5
-0.8
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.0
+0.1
-0.6
-0.8
-0.4
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.1
-0.1
-0.6
-0.7
-0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.2
-0.2
+0.2
-1.5
-0.3
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.2
-0.1
-0.2
-0.5
-0.7
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.0
+0.1
-0.6
-0.3
-0.6
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.0
-0.1
-0.4
-0.4
-0.4
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.1
-0.1
-0.4
-0.1
-0.6
sulfur source
NFM with succinate
-0.1
-0.2
-0.1
-0.4
-0.5
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.1
+0.1
-0.3
-0.4
-0.8
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.0
+0.0
-0.3
-0.4
-0.6
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.3
-0.2
+0.1
-0.5
-0.3
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.0
-0.1
-0.2
-0.5
-0.4
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.1
+0.3
-0.3
-0.5
-0.6
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.1
-0.0
-0.3
-0.6
-0.2
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.2
+0.2
-0.2
-0.4
-0.3
sulfur source
NFM with pyruvate
-0.2
+0.3
+0.1
-0.5
+0.2
sulfur source
NFM with pyruvate
+0.2
-0.1
-0.3
+0.2
+0.6
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