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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_019425 and TX73_019430 are separated by 203 nucleotides
TX73_019430 and TX73_019435 overlap by 4 nucleotides
TX73_019435 and TX73_019440 are separated by 25 nucleotides
TX73_019440 and TX73_019445 are separated by 305 nucleotides
TX73_019425: TX73_019425 - cache domain-containing protein, at 4,243,307 to 4,243,762
_019425
TX73_019430: TX73_019430 - transglutaminase family protein, at 4,243,966 to 4,244,844
_019430
TX73_019435: TX73_019435 - circularly permuted type 2 ATP-grasp protein, at 4,244,841 to 4,247,342
_019435
TX73_019440: TX73_019440 - transglutaminase family protein, at 4,247,368 to 4,250,709
_019440
TX73_019445: TX73_019445 - aldolase/citrate lyase family protein, at 4,251,015 to 4,251,791
_019445
Group
Condition
TX73
_019425
TX73
_019430
TX73
_019435
TX73
_019440
TX73
_019445
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.3
-0.4
+0.0
+0.1
-0.2
survival
starvation expt 4; 7 days; outgrowth in CAAc
-0.4
-0.2
-0.3
+0.2
+0.0
survival
starvation expt 1; 7 days; outgrowth in CAAc
-0.3
-0.2
-0.3
+0.2
-0.1
carbon source
4-Aminobutyric (C); anaerobic
-0.4
-0.1
-0.1
+0.2
-0.2
carbon source
MDC_bicarb with butyrate
-0.3
-0.2
-0.1
+0.1
+0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.3
-0.2
+0.0
+0.2
-0.1
survival
starvation expt 1; 14 days; outgrowth in CAAc
-0.3
+0.2
-0.1
+0.2
-0.3
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.6
+0.1
+0.1
+0.1
-0.1
sulfur source control
sulfur source control
+0.2
-0.7
+0.2
+0.1
-0.1
sulfur source
Sulfoacetic sulfur source
-0.4
-0.1
-0.1
+0.1
+0.2
survival
starvation expt 1; 3 days; outgrowth in CAAc
-0.4
+0.2
-0.2
+0.2
+0.1
carbon source
MDC_bicarb with butyrate and Adenine
-0.5
+0.0
+0.0
+0.1
+0.2
carbon source
MDC_bicarb with butyrate and Adenine
-0.4
-0.0
+0.1
+0.2
+0.1
carbon source
Citraconic (C); anaerobic
-0.4
+0.4
+0.2
+0.0
+0.0
carbon source
aspen wood chips that have been decomposed by a fungus (C)
+0.1
+0.3
+0.1
+0.0
-0.4
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.4
+0.3
-0.2
+0.2
+0.3
sulfur source
sodium isethionate sulfur source
+0.1
-0.3
+0.3
-0.1
+0.3
carbon source
Citraconic (C); anaerobic
+0.0
+0.4
+0.1
-0.1
-0.2
carbon source
Fumarate (C); anaerobic
+0.2
-0.2
-0.1
+0.1
+0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.5
+0.1
-0.2
+0.3
+0.7
sulfur source
2-(Methylthio)ethanol sulfur source
+0.4
-0.2
+0.0
+0.1
+0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.1
+0.3
+0.2
+0.1
+0.1
sulfur source
NFM with pyruvate
+0.2
+0.3
-0.3
+0.1
+0.3
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
+0.3
+0.0
-0.0
+0.1
+0.4
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
+0.3
-0.1
+0.2
+0.1
+0.2
carbon source
Citraconic (C); anaerobic
-0.0
+0.5
+0.3
+0.0
-0.0
sulfur source
NFM with pyruvate
+0.2
-0.7
+0.3
+0.4
+0.7
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.0
+0.2
+0.1
+0.2
+0.5
carbon source dark aerobic
PM with succinate aerobic in dark
+0.4
+0.2
+0.1
+0.0
+0.4
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.1
+0.5
-0.0
+0.3
+0.8
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