Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_019425 and TX73_019430 are separated by 203 nucleotidesTX73_019430 and TX73_019435 overlap by 4 nucleotidesTX73_019435 and TX73_019440 are separated by 25 nucleotidesTX73_019440 and TX73_019445 are separated by 305 nucleotides TX73_019425: TX73_019425 - cache domain-containing protein, at 4,243,307 to 4,243,762 _019425 TX73_019430: TX73_019430 - transglutaminase family protein, at 4,243,966 to 4,244,844 _019430 TX73_019435: TX73_019435 - circularly permuted type 2 ATP-grasp protein, at 4,244,841 to 4,247,342 _019435 TX73_019440: TX73_019440 - transglutaminase family protein, at 4,247,368 to 4,250,709 _019440 TX73_019445: TX73_019445 - aldolase/citrate lyase family protein, at 4,251,015 to 4,251,791 _019445
Group Condition TX73_019425 TX73_019430 TX73_019435 TX73_019440 TX73_019445
sulfur source Dimethylsulfoniopropionate sulfur source -0.3 -0.4 +0.0 +0.1 -0.2
survival starvation expt 4; 7 days; outgrowth in CAAc -0.4 -0.2 -0.3 +0.2 +0.0
survival starvation expt 1; 7 days; outgrowth in CAAc -0.3 -0.2 -0.3 +0.2 -0.1
carbon source 4-Aminobutyric (C); anaerobic -0.4 -0.1 -0.1 +0.2 -0.2
carbon source MDC_bicarb with butyrate -0.3 -0.2 -0.1 +0.1 +0.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.3 -0.2 +0.0 +0.2 -0.1
survival starvation expt 1; 14 days; outgrowth in CAAc -0.3 +0.2 -0.1 +0.2 -0.3
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.6 +0.1 +0.1 +0.1 -0.1
sulfur source control sulfur source control +0.2 -0.7 +0.2 +0.1 -0.1
sulfur source Sulfoacetic sulfur source -0.4 -0.1 -0.1 +0.1 +0.2
survival starvation expt 1; 3 days; outgrowth in CAAc -0.4 +0.2 -0.2 +0.2 +0.1
carbon source MDC_bicarb with butyrate and Adenine -0.5 +0.0 +0.0 +0.1 +0.2
carbon source MDC_bicarb with butyrate and Adenine -0.4 -0.0 +0.1 +0.2 +0.1
carbon source Citraconic (C); anaerobic -0.4 +0.4 +0.2 +0.0 +0.0
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.1 +0.3 +0.1 +0.0 -0.4
stress L-Lactate (C) with 10 mM Sodium Chloride -0.4 +0.3 -0.2 +0.2 +0.3
sulfur source sodium isethionate sulfur source +0.1 -0.3 +0.3 -0.1 +0.3
carbon source Citraconic (C); anaerobic +0.0 +0.4 +0.1 -0.1 -0.2
carbon source Fumarate (C); anaerobic +0.2 -0.2 -0.1 +0.1 +0.3
stress L-Lactate (C) with 10 mM Sodium Chloride -0.5 +0.1 -0.2 +0.3 +0.7
sulfur source 2-(Methylthio)ethanol sulfur source +0.4 -0.2 +0.0 +0.1 +0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.1 +0.3 +0.2 +0.1 +0.1
sulfur source NFM with pyruvate +0.2 +0.3 -0.3 +0.1 +0.3
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM +0.3 +0.0 -0.0 +0.1 +0.4
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM +0.3 -0.1 +0.2 +0.1 +0.2
carbon source Citraconic (C); anaerobic -0.0 +0.5 +0.3 +0.0 -0.0
sulfur source NFM with pyruvate +0.2 -0.7 +0.3 +0.4 +0.7
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.0 +0.2 +0.1 +0.2 +0.5
carbon source dark aerobic PM with succinate aerobic in dark +0.4 +0.2 +0.1 +0.0 +0.4
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.1 +0.5 -0.0 +0.3 +0.8
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