Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_018985 and TX73_018990 are separated by 46 nucleotidesTX73_018990 and TX73_018995 are separated by 279 nucleotidesTX73_018995 and TX73_019000 are separated by 219 nucleotidesTX73_019000 and TX73_019005 overlap by 4 nucleotides TX73_018985: TX73_018985 - urease subunit gamma, at 4,136,030 to 4,136,332 _018985 TX73_018990: TX73_018990 - urease accessory protein UreD, at 4,136,379 to 4,137,215 _018990 TX73_018995: TX73_018995 - urea ABC transporter ATP-binding subunit UrtE, at 4,137,495 to 4,138,190 _018995 TX73_019000: TX73_019000 - urea ABC transporter ATP-binding protein UrtD, at 4,138,410 to 4,139,174 _019000 TX73_019005: TX73_019005 - urea ABC transporter permease subunit UrtC, at 4,139,171 to 4,140,346 _019005
Group Condition TX73_018985 TX73_018990 TX73_018995 TX73_019000 TX73_019005
sulfur source NFM with succinate -0.2 -0.2 -0.2 -0.2 +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride -1.1 -0.1 +0.3 -0.1 +0.4
sulfur source control sulfur source control -0.6 -0.1 +0.3 -0.0 -0.2
sulfur source Dimethylsulfoniopropionate sulfur source -0.3 -0.1 +0.3 -0.1 -0.4
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.4 +0.0 +0.0 -0.3 +0.3
carbon source MDC_bicarb with butyrate and Adenine -0.6 +0.1 +0.1 +0.1 -0.1
sulfur source NFM with pyruvate +0.3 +0.4 -0.7 -0.1 -0.3
carbon source MDC_bicarb with butyrate and Adenine -0.0 +0.2 +0.2 -0.3 -0.2
carbon source aspen wood chips that have been decomposed by a fungus (C) -0.1 -0.1 +0.2 +0.2 -0.3
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.8 +0.0 +0.3 +0.0 +0.4
carbon source dark aerobic PM with succinate aerobic in dark +0.3 -0.1 +0.2 -0.3 -0.2
survival outgrowth control starvation outgrowth control in CAAc -0.5 +0.1 -0.1 +0.3 +0.2
stress L-Lactate (C) with 10 mM Sodium Chloride -0.2 +0.1 +0.1 -0.2 +0.3
survival outgrowth control starvation outgrowth control in CAAc +0.2 -0.1 +0.1 -0.4 +0.1
carbon source PM with succinate and Sodium Formate anaerobic with light +0.0 -0.3 +0.2 -0.1 +0.2
sulfur source control sulfur source control +0.2 +0.1 +0.2 -0.2 -0.3
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.5 -0.1 -0.1 -0.2 +0.2
carbon source aspen wood chips that have been decomposed by a fungus (C) -0.3 -0.1 +0.4 +0.1 +0.1
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM -0.2 +0.2 +0.1 -0.2 +0.3
sulfur source 2-(Methylthio)ethanol sulfur source +0.4 -0.1 +0.2 -0.2 +0.0
carbon source MDC_bicarb with butyrate +0.2 +0.3 +0.2 -0.1 -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.3 +0.4 +0.1 +0.2 +0.4
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.1 -0.0 +0.5 +0.2 -0.1
sulfur source NFM with pyruvate +1.1 +0.3 -0.4 -0.3 -0.0
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.3 +0.4 -0.2 +0.1 +0.1
stress PM_N2O butyrate and nitrate 0.1 mM +0.3 +0.2 +0.1 -0.1 +0.2
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.6 -0.1 -0.0 +0.1 +0.2
survival starvation expt 3; 7 days; outgrowth in CAAc +0.3 +0.1 +0.2 +0.2 +0.2
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.1 +0.2 +0.2 +0.2 +0.4
stress L-Lactate (C) with 10 mM Sodium Chloride -0.3 +0.5 +0.4 +0.4 +0.3
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