Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_018815 and TX73_018820 are separated by 9 nucleotidesTX73_018820 and TX73_018825 are separated by 97 nucleotidesTX73_018825 and TX73_018830 are separated by 19 nucleotidesTX73_018830 and TX73_018835 are separated by 215 nucleotides TX73_018815: TX73_018815 - prolyl aminopeptidase, at 4,091,520 to 4,092,509 _018815 TX73_018820: TX73_018820 - SDR family oxidoreductase, at 4,092,519 to 4,093,292 _018820 TX73_018825: TX73_018825 - helix-turn-helix domain-containing protein, at 4,093,390 to 4,093,872 _018825 TX73_018830: TX73_018830 - hypothetical protein, at 4,093,892 to 4,094,566 _018830 TX73_018835: TX73_018835 - bifunctional transaldolase/phosoglucose isomerase, at 4,094,782 to 4,097,634 _018835
Group Condition TX73_018815 TX73_018820 TX73_018825 TX73_018830 TX73_018835
sulfur source Dimethylsulfoniopropionate sulfur source -0.1 +0.0 -0.5 -0.0 -1.9
survival starvation expt 1; 7 days; outgrowth in CAAc -0.1 -0.1 -0.1 +0.0 -2.0
sulfur source Sulfoacetic sulfur source -0.1 -0.1 -0.4 +0.0 -1.6
sulfur source control Dimethyl sulfide sulfur source +0.0 -0.0 -0.3 +0.1 -1.8
survival starvation expt 3; 7 days; outgrowth in CAAc -0.0 -0.1 +0.0 -0.1 -1.7
survival starvation expt 2; 3 days; outgrowth in CAAc +0.0 -0.1 -0.0 -0.0 -1.6
survival starvation expt 2; 7 days; outgrowth in CAAc +0.0 -0.1 +0.1 +0.1 -1.9
survival starvation expt 1; 14 days; outgrowth in CAAc -0.1 -0.1 -0.1 +0.1 -1.6
sulfur source Dimethylsulfoniopropionate sulfur source -0.0 +0.1 -0.2 -0.1 -1.5
sulfur source Dimethylsulfoniopropionate sulfur source -0.1 +0.1 -0.2 -0.1 -1.2
survival starvation expt 4; 7 days; outgrowth in CAAc -0.0 -0.1 -0.2 -0.0 -1.2
sulfur source NFM_No_Mo_Plus_VCl3 with acetate trihydrate -0.0 +0.0 -0.1 -0.0 -1.4
survival starvation expt 1; 3 days; outgrowth in CAAc -0.0 -0.1 -0.0 -0.0 -1.3
survival starvation expt 3; 14 days; outgrowth in CAAc +0.0 -0.2 -0.3 +0.1 -1.0
sulfur source control Dimethyl sulfide sulfur source +0.0 +0.1 -0.2 +0.0 -1.2
carbon source acetate trihydrate (C) +0.1 -0.1 -0.1 +0.0 -1.2
survival starvation expt 3; 3 days; outgrowth in CAAc +0.1 -0.0 -0.2 -0.0 -1.1
sulfur source Sulfoacetic sulfur source +0.0 -0.1 -0.0 +0.1 -1.2
survival starvation expt 4; 3 days; outgrowth in CAAc +0.0 -0.1 +0.1 -0.1 -1.1
stress L-Lactate (C) with 10 mM Sodium Chloride -0.3 -0.2 -0.7 -0.0 +0.3
stress L-Lactate (C) with 10 mM Sodium Chloride -0.3 +0.2 -0.8 +0.1 +0.5
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.2 -0.1 -0.5 -0.0 +0.7
carbon source 4-Hydroxybenzoate (C) +0.0 -0.2 -0.3 -0.2 +1.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 -0.1 -0.3 -0.0 +0.9
carbon source 4-Hydroxybenzoate (C) -0.1 -0.1 -0.2 -0.1 +0.9
carbon source 4-Hydroxybenzoate (C) -0.0 -0.2 -0.3 +0.0 +1.1
sulfur source NFM with pyruvate -0.2 +0.2 -0.4 +0.0 +0.9
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.1 +0.0 -0.3 -0.1 +1.0
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.1 +0.0 -0.4 +0.1 +2.0
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.0 +0.0 -0.5 +0.1 +2.7
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TX73_018815
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TX73_018820
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TX73_018835
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