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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_018800 and TX73_018805 are separated by 18 nucleotides
TX73_018805 and TX73_018810 are separated by 71 nucleotides
TX73_018810 and TX73_018815 are separated by 136 nucleotides
TX73_018815 and TX73_018820 are separated by 9 nucleotides
TX73_018800: TX73_018800 - glutathione peroxidase, at 4,089,162 to 4,089,638
_018800
TX73_018805: TX73_018805 - amidase family protein, at 4,089,657 to 4,091,054
_018805
TX73_018810: TX73_018810 - hypothetical protein, at 4,091,126 to 4,091,383
_018810
TX73_018815: TX73_018815 - prolyl aminopeptidase, at 4,091,520 to 4,092,509
_018815
TX73_018820: TX73_018820 - SDR family oxidoreductase, at 4,092,519 to 4,093,292
_018820
Group
Condition
TX73
_018800
TX73
_018805
TX73
_018810
TX73
_018815
TX73
_018820
sulfur source
NFM with pyruvate
+0.5
+0.0
-1.2
-0.2
-0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.2
+0.1
-0.6
-0.3
+0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.2
-0.2
-0.5
+0.2
+0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
+0.7
-0.5
-0.3
-0.2
carbon source
MDC_bicarb with butyrate
-0.3
-0.1
+0.1
-0.1
-0.1
carbon source
MDC_bicarb with butyrate and Adenine
-0.2
-0.1
+0.2
-0.0
-0.2
carbon source
MDC_bicarb with butyrate
-0.2
-0.1
+0.2
+0.1
-0.2
sulfur source
ethyl methyl sulfide sulfur source
-0.0
+0.3
-0.2
-0.1
-0.1
sulfur source control
Dimethyl sulfide sulfur source
-0.3
+0.2
-0.1
+0.0
+0.1
sulfur source
Thiamine HCl sulfur source
-0.1
+0.3
-0.1
-0.1
-0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.0
+0.1
-0.4
-0.1
+0.3
sulfur source
Taurine sulfur source
+0.0
+0.3
-0.2
-0.1
-0.1
sulfur source
ethyl methyl sulfide sulfur source
-0.1
+0.3
-0.1
-0.1
-0.1
carbon source
4-Aminobutyric (C); anaerobic
+0.1
+0.3
-0.2
-0.1
-0.1
sulfur source
Taurine sulfur source
+0.1
+0.4
-0.3
-0.1
-0.0
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.1
+0.1
-0.2
+0.2
+0.0
sulfur source
NFM with succinate
-0.2
+0.1
+0.2
-0.1
+0.1
survival
starvation expt 1; 7 days; outgrowth in CAAc
+0.2
-0.1
+0.2
-0.1
-0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
+0.4
-0.2
-0.1
+0.2
carbon source
Sebacic (C); anaerobic
+0.0
+0.3
+0.2
-0.2
-0.1
sulfur source
ethyl methyl sulfide sulfur source
+0.2
+0.4
-0.2
-0.1
-0.0
sulfur source
Thiamine HCl sulfur source
+0.1
+0.4
-0.2
-0.0
+0.0
sulfur source control
Dimethyl sulfide sulfur source
-0.0
+0.3
-0.1
-0.1
+0.1
sulfur source
ethyl methyl sulfide sulfur source
+0.2
+0.3
-0.1
+0.0
-0.1
carbon source
Sebacic (C); anaerobic
-0.0
+0.2
+0.3
-0.1
-0.1
sulfur source
Thiamine HCl sulfur source
+0.3
+0.2
+0.1
-0.1
-0.1
carbon source
Pimelic (C); anaerobic
-0.1
+0.1
+0.4
-0.0
+0.0
carbon source
Pimelic (C); anaerobic
+0.1
+0.2
+0.3
-0.0
-0.1
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
+0.1
-0.0
+0.4
+0.1
+0.1
sulfur source
NFM with pyruvate
+0.4
+0.4
-0.1
-0.2
+0.2
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