Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_018335 and TX73_018340 are separated by 498 nucleotidesTX73_018340 and TX73_018350 are separated by 596 nucleotidesTX73_018350 and TX73_018355 overlap by 2 nucleotidesTX73_018355 and TX73_018360 are separated by 51 nucleotides TX73_018335: TX73_018335 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 4,002,243 to 4,003,241 _018335 TX73_018340: TX73_018340 - N-acetylmuramoyl-L-alanine amidase, at 4,003,740 to 4,004,606 _018340 TX73_018350: TX73_018350 - Fic family protein, at 4,005,203 to 4,005,772 _018350 TX73_018355: TX73_018355 - hypothetical protein, at 4,005,771 to 4,005,971 _018355 TX73_018360: TX73_018360 - DHA2 family efflux MFS transporter permease subunit, at 4,006,023 to 4,007,615 _018360
Group Condition TX73_018335 TX73_018340 TX73_018350 TX73_018355 TX73_018360
survival starvation expt 1; 14 days; outgrowth in CAAc -2.1 -2.6 +0.1 N.D. -0.0
carbon source 4-Hydroxybenzoate (C) -2.5 -1.1 -0.2 N.D. -0.0
stress L-Lactate (C) with 10 mM Sodium Chloride -2.0 -1.4 -0.5 N.D. +0.3
sulfur source control sulfur source control -1.8 -1.3 -0.1 N.D. -0.1
stress L-Lactate (C) with 10 mM Sodium Chloride -1.8 -1.7 +0.1 N.D. +0.3
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -1.6 -1.4 -0.2 N.D. +0.1
survival starvation expt 1; 7 days; outgrowth in CAAc -1.7 -1.5 +0.2 N.D. -0.0
carbon source Fumarate (C); anaerobic -1.6 -1.1 +0.1 N.D. -0.2
sulfur source Thiamine HCl sulfur source -1.2 -1.5 -0.0 N.D. -0.2
carbon source Citraconic (C); anaerobic -1.5 -1.3 +0.0 N.D. +0.1
survival starvation expt 3; 7 days; outgrowth in CAAc -1.3 -1.6 +0.0 N.D. +0.1
sulfur source control Dimethyl sulfide sulfur source -1.1 -1.7 -0.1 N.D. +0.1
survival starvation expt 1; 3 days; outgrowth in CAAc -1.5 -1.1 -0.0 N.D. +0.0
survival starvation expt 4; 14 days; outgrowth in CAAc -1.2 -1.5 -0.0 N.D. +0.1
survival starvation expt 3; 14 days; outgrowth in CAAc -1.3 -1.4 +0.2 N.D. -0.1
survival starvation expt 2; 14 days; outgrowth in CAAc -2.0 -0.7 +0.2 N.D. +0.0
carbon source Fumarate (C); anaerobic -1.2 -1.3 -0.1 N.D. +0.1
carbon source Citraconic (C); anaerobic -1.2 -1.4 +0.2 N.D. +0.0
sulfur source Dimethylsulfoniopropionate sulfur source -1.5 -1.0 +0.0 N.D. +0.1
carbon source 4-Aminobutyric (C); anaerobic -0.7 -1.9 +0.0 N.D. +0.2
survival starvation expt 2; 7 days; outgrowth in CAAc -1.5 -1.0 +0.2 N.D. +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride -1.6 -0.7 -0.1 N.D. +0.3
carbon source 4-Aminobutyric (C); anaerobic -0.9 -1.5 +0.2 N.D. +0.2
carbon source L-Leucine (C); anaerobic +0.2 -2.4 +0.2 N.D. +0.2
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.9 -2.0 -0.0 N.D. +0.0
stress PM_N2O butyrate and nitrate 0.1 mM +1.2 -1.4 -0.1 N.D. +0.2
stress PM_N2O butyrate and nitrate 0.1 mM +1.4 -1.4 -0.1 N.D. +0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +1.6 -1.1 +0.1 N.D. +0.0
sulfur source NFM with pyruvate +1.4 +1.2 -0.0 N.D. +0.1
sulfur source NFM with pyruvate +2.1 +1.7 -0.1 N.D. +0.2
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