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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_018135 and TX73_018140 overlap by 4 nucleotides
TX73_018140 and TX73_018145 are separated by 20 nucleotides
TX73_018145 and TX73_018150 are separated by 135 nucleotides
TX73_018150 and TX73_018155 are separated by 66 nucleotides
TX73_018135: TX73_018135 - DUF4169 family protein, at 3,951,343 to 3,951,531
_018135
TX73_018140: TX73_018140 - ribbon-helix-helix domain-containing protein, at 3,951,528 to 3,951,806
_018140
TX73_018145: TX73_018145 - AsmA-like C-terminal region-containing protein, at 3,951,827 to 3,955,642
_018145
TX73_018150: TX73_018150 - FAD-linked oxidase C-terminal domain-containing protein, at 3,955,778 to 3,957,205
_018150
TX73_018155: TX73_018155 - thioesterase family protein, at 3,957,272 to 3,957,805
_018155
Group
Condition
TX73
_018135
TX73
_018140
TX73
_018145
TX73
_018150
TX73
_018155
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-6.2
-4.7
-0.1
-0.0
-0.0
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-5.1
-5.2
-0.1
-0.2
-0.1
carbon source
MDC_bicarb with butyrate and Adenine
-6.7
-3.5
-0.2
-0.1
+0.0
carbon source
MDC_bicarb with butyrate and Adenine
-4.3
-5.1
-0.1
-0.3
-0.1
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-4.6
-4.6
-0.2
-0.1
-0.1
stress
PM_N2O butyrate and nitrate 0.1 mM
-5.4
-4.0
-0.1
-0.0
+0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-5.2
-3.1
-0.3
-0.1
+0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
-4.5
-3.6
-0.1
-0.3
-0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-2.5
-5.3
-0.2
-0.2
-0.1
carbon source
MDC_bicarb with butyrate
-6.6
-1.1
-0.2
-0.1
-0.0
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-4.3
-3.4
-0.0
-0.1
-0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
-4.5
-3.0
-0.1
-0.4
+0.3
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-3.4
-3.9
-0.1
-0.1
-0.2
sulfur source control
Dimethyl sulfide sulfur source
-4.1
-3.1
-0.1
-0.0
-0.2
sulfur source control
Dimethyl sulfide sulfur source
-2.6
-4.6
-0.0
-0.0
-0.2
carbon source
4-Hydroxybenzoate (C)
-5.9
-0.8
+0.0
-0.2
-0.2
sulfur source control
Dimethyl sulfide sulfur source
-5.1
-1.9
+0.0
-0.0
-0.1
stress
PM_N2O butyrate and nitrate 0.1 mM
-2.7
-4.1
-0.2
-0.1
-0.1
sulfur source
Dimethylsulfoniopropionate sulfur source
-4.5
-2.2
-0.1
-0.2
+0.0
carbon source
MDC_bicarb with butyrate and Adenine
-4.9
-2.1
-0.1
-0.1
+0.2
carbon source
MDC_bicarb with butyrate
-3.9
-2.4
-0.2
-0.2
-0.2
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
-4.1
-2.4
-0.1
-0.0
-0.1
sulfur source
sodium isethionate sulfur source
-2.3
-4.0
-0.1
-0.1
-0.1
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
-4.0
-2.3
-0.1
-0.0
-0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-3.6
-2.4
-0.2
-0.1
-0.1
carbon source
Butyric Acid (C); anaerobic
-4.2
-2.2
-0.0
+0.1
-0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-3.7
-2.4
-0.1
-0.3
+0.2
sulfur source
Dimethylsulfoniopropionate sulfur source
-4.1
-2.0
-0.1
-0.0
-0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
-2.6
-3.1
-0.1
-0.4
+0.1
stress
PM_argon75_N2O25 butyrate and nitrate 0.1 mM
-2.7
-3.4
-0.0
+0.0
+0.1
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