Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_018070 and TX73_018075 are separated by 242 nucleotidesTX73_018075 and TX73_018080 overlap by 4 nucleotidesTX73_018080 and TX73_018085 are separated by 144 nucleotidesTX73_018085 and TX73_018090 are separated by 17 nucleotides TX73_018070: TX73_018070 - DUF2065 domain-containing protein, at 3,939,778 to 3,939,978 _018070 TX73_018075: TX73_018075 - protease modulator HflC, at 3,940,221 to 3,941,147 _018075 TX73_018080: TX73_018080 - FtsH protease activity modulator HflK, at 3,941,144 to 3,942,295 _018080 TX73_018085: TX73_018085 - dihydrofolate reductase, at 3,942,440 to 3,942,961 _018085 TX73_018090: TX73_018090 - thymidylate synthase, at 3,942,979 to 3,943,773 _018090
Group Condition TX73_018070 TX73_018075 TX73_018080 TX73_018085 TX73_018090
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -1.7 -3.3 -3.0 N.D. N.D.
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -1.5 -2.7 -3.1 N.D. N.D.
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.4 -2.0 -2.0 N.D. N.D.
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.1 -1.9 -1.5 N.D. N.D.
survival starvation expt 3; 14 days; outgrowth in CAAc -0.6 -1.1 -1.5 N.D. N.D.
survival starvation expt 1; 14 days; outgrowth in CAAc -0.8 -1.1 -1.3 N.D. N.D.
survival starvation expt 4; 14 days; outgrowth in CAAc -0.4 -0.9 -1.2 N.D. N.D.
survival starvation expt 2; 14 days; outgrowth in CAAc -0.4 -0.9 -1.1 N.D. N.D.
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.2 -0.6 -1.3 N.D. N.D.
carbon source dark aerobic PM with succinate aerobic in dark -0.6 -0.4 -0.9 N.D. N.D.
carbon source MDC_bicarb with butyrate and Adenine -0.0 -0.6 -1.1 N.D. N.D.
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.2 -0.8 -0.7 N.D. N.D.
sulfur source sodium isethionate sulfur source -0.8 +0.7 +0.6 N.D. N.D.
sulfur source Thiamine HCl sulfur source -0.4 +0.9 +0.5 N.D. N.D.
carbon source Fumarate (C); anaerobic -0.4 +1.0 +0.6 N.D. N.D.
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM -0.4 +0.8 +0.9 N.D. N.D.
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM -0.2 +0.8 +0.7 N.D. N.D.
sulfur source Taurine sulfur source -0.2 +1.0 +0.8 N.D. N.D.
sulfur source ethyl methyl sulfide sulfur source +0.1 +0.7 +0.8 N.D. N.D.
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.1 +0.9 +0.6 N.D. N.D.
sulfur source Thiamine HCl sulfur source +0.3 +0.8 +0.7 N.D. N.D.
sulfur source control sulfur source control +0.2 +0.7 +0.8 N.D. N.D.
sulfur source control sulfur source control -0.0 +0.9 +0.8 N.D. N.D.
carbon source Fumarate (C); anaerobic +0.1 +1.1 +0.6 N.D. N.D.
sulfur source Taurine sulfur source +0.1 +0.9 +0.9 N.D. N.D.
sulfur source Taurine sulfur source -0.0 +1.0 +1.0 N.D. N.D.
sulfur source Taurine sulfur source +0.1 +1.0 +0.9 N.D. N.D.
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.2 +1.4 +1.0 N.D. N.D.
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.2 +1.5 +1.1 N.D. N.D.
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.1 +1.4 +1.3 N.D. N.D.
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TX73_018070
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TX73_018075
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TX73_018090
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